3CLS | pdb_00003cls

Crystal structure of the R236C mutant of ETF from Methylophilus methylotrophus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B [auth D]	d3clsd1	Alpha and beta proteins (a/b)	Adenine nucleotide alpha hydrolase-like	Adenine nucleotide alpha hydrolases-like	ETFP subunits	Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain	(Methylophilus methylotrophus ) [TaxId: 17 ],	SCOPe (2.08)
B [auth D]	d3clsd2	Alpha and beta proteins (a/b)	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	C-terminal domain of the electron transfer flavoprotein alpha subunit	C-terminal domain of the electron transfer flavoprotein alpha subunit	(Methylophilus methylotrophus ) [TaxId: 17 ],	SCOPe (2.08)
A [auth C]	d3clsc_	Alpha and beta proteins (a/b)	Adenine nucleotide alpha hydrolase-like	Adenine nucleotide alpha hydrolases-like	ETFP subunits	Small, beta subunit of electron transfer flavoprotein ETFP	(Methylophilus methylotrophus ) [TaxId: 17 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth D]	SCOP2 Family	ETFP subunits	8027765	4003848	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Family	C-terminal domain of the electron transfer flavoprotein alpha subunit	8027766	4003888	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Superfamily	Adenine nucleotide alpha hydrolases-like	8040144	3001593	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Superfamily	DHS-like NAD/FAD-binding domain	8040145	3001728	SCOP2 (2022-06-29)
A [auth C]	SCOP2 Family	ETFP subunits	8027764	4003848	SCOP2 (2022-06-29)
A [auth C]	SCOP2 Superfamily	Adenine nucleotide alpha hydrolases-like	8040143	3001593	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth D]		e3clsD1	A: Rossmann-like	X: Rossmann-related	H: DHS-like NAD/FAD-binding domain	T: ETF_alpha	F:	ECOD (20:10:01)
B [auth D]		e3clsD2	A: HUP domain-like	X: HUP domains	H: HUP domains	T: ETF	F:	ECOD (20:10:01)
A [auth C]		e3clsC1	A: HUP domain-like	X: HUP domains	H: HUP domains	T: ETF	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth D]	3.40.50.620	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HUPs	CATH (4.3.0)
B [auth D]	3.40.50.1220	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	TPP-binding domain	CATH (4.3.0)
A [auth C]	3.40.50.620	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HUPs	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth D]	Electron transfer flavoprotein subunit alpha	electron transfer activity flavin adenine dinucleotide binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding small molecule binding	fatty acid metabolic process lipid catabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process primary metabolic process lipid modification organic acid metabolic process organic acid catabolic process fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation carboxylic acid catabolic process fatty acid beta-oxidation fatty acid metabolic process lipid catabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process primary metabolic process lipid modification organic acid metabolic process organic acid catabolic process fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation carboxylic acid catabolic process fatty acid beta-oxidation metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process lipid oxidation small molecule catabolic process fatty acid beta-oxidation using acyl-CoA dehydrogenase lipid metabolic process	-
A [auth C]	Electron transfer flavoprotein subunit beta	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding electron transfer activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth D]	IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal	Domain
B [auth D]	IPR001308	Electron transfer flavoprotein alpha subunit/FixB	Family
B [auth D]	IPR014731	Electron transfer flavoprotein, alpha subunit, C-terminal	Domain
B [auth D]	IPR029035	DHS-like NAD/FAD-binding domain superfamily	Homologous Superfamily
B [auth D]	IPR018206	Electron transfer flavoprotein subunit alpha, conserved site	Conserved Site
B [auth D]	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	Homologous Superfamily
B [auth D]	IPR033947	Electron transfer flavoprotein, alpha subunit, N-terminal	Domain
A [auth C]	IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal	Domain
A [auth C]	IPR033948	Electron transfer flavoprotein, beta subunit, N-terminal	Domain
A [auth C]	IPR000049	Electron transfer flavoprotein, beta-subunit, conserved site	Conserved Site
A [auth C]	IPR012255	Electron transfer flavoprotein, beta subunit	Family
A [auth C]	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.