3C7J | pdb_00003c7j

Crystal structure of transcriptional regulator (GntR family member) from Pseudomonas syringae pv. tomato str. DC3000

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3c7jB1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: GMC_oxred_N,GMC_oxred_CF:ECOD (20:10:01)
Ae3c7jA1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: GMC_oxred_N,GMC_oxred_CF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
B1.20.120.530 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) GntR ligand-binding domain-likeCATH (4.3.0)
A1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
A1.20.120.530 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) GntR ligand-binding domain-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Transcriptional regulator, GntR family - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR008920Transcription regulator FadR/GntR, C-terminalHomologous Superfamily
A, B
IPR000524Transcription regulator HTH, GntRDomain
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR011711GntR, C-terminalDomain