3BQK

Structure of a chondroitin sulphate binding DBL3X from a var2csa encoded PfEMP1 protein in complex with sulphate


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05424e3bqkA2 A: alpha bundlesX: Duffy-binding-like domain, N-terminal subdomain (From Topology)H: Duffy-binding-like domain, N-terminal subdomain (From Topology)T: Duffy-binding-like domain, N-terminal subdomainF: PF05424ECOD (1.6)
APF22672e3bqkA1 A: alpha bundlesX: Duffy-binding-like domain, C-terminal subdomain (From Topology)H: Duffy-binding-like domain, C-terminal subdomain (From Topology)T: Duffy-binding-like domain, C-terminal subdomainF: PF22672ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1310.20 Mainly Alpha Up-down Bundle 5 helical Cullin repeat like Duffy-antigen binding domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05424Duffy binding domain (Duffy_binding)Duffy binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Erythrocyte membrane protein 1 -