3BO6 | pdb_00003bo6

Structure of the Chromobacterium violaceum VirA (SpvC) Phosphothreonine Lyase effector protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Phosphothreonine lyase-like	8090468	3002439	SCOP2B (2022-06-29)
A	SCOP2 Family	Phosphothreonine lyase-like	8051666	4007459	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Phosphothreonine lyase-like	8090468	3002439	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	VRP3	e3bo6B1	A: a+b two layers	X: Translation initiation factor eIF4e and phosphothreonine lyase (From Topology)	H: Translation initiation factor eIF4e and phosphothreonine lyase (From Topology)	T: Translation initiation factor eIF4e and phosphothreonine lyase	F: VRP3	ECOD (1.6)
A	VRP3	e3bo6A1	A: a+b two layers	X: Translation initiation factor eIF4e and phosphothreonine lyase (From Topology)	H: Translation initiation factor eIF4e and phosphothreonine lyase (From Topology)	T: Translation initiation factor eIF4e and phosphothreonine lyase	F: VRP3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.2430.10	Alpha Beta	2-Layer Sandwich	Phosphothreonine lyase fold	phosphothreonine lyase	CATH (4.3.0)
A	3.30.2430.10	Alpha Beta	2-Layer Sandwich	Phosphothreonine lyase fold	phosphothreonine lyase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03536	Salmonella virulence-associated 28kDa protein (VRP3)	Salmonella virulence-associated 28kDa protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Hydrophilic protein, virA protein	-	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR003519	OspF/SpvC	Family
A, B	IPR038498	OspF/SpvC superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.