3BKH | pdb_00003bkh

Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATransglye3bkhA3 A: a/b three-layered sandwichesX: POZ domainH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: TransglyECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.101.10 Mainly Alpha Orthogonal Bundle Muramoyl-pentapeptide Carboxypeptidase domain 1CATH (4.3.0)
A1.10.530.10 Mainly Alpha Orthogonal Bundle Lysozyme CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01471Putative peptidoglycan binding domain (PG_binding_1)Putative peptidoglycan binding domainThis domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ...This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins [3]. The domain is found to bind peptidoglycan experimentally [4].
Domain
PF01464Transglycosylase SLT domain (SLT)Transglycosylase SLT domainThis family is distantly related to Pfam:PF00062. Members are found in phages, type II, type III and type IV secretion systems (reviewed in [4]). Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage