3BJQ | pdb_00003bjq

CRYSTAL STRUCTURE OF A PHAGE-RELATED PROTEIN (BB3626) FROM BORDETELLA BRONCHISEPTICA RB50 AT 2.05 A RESOLUTION

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
E	SCOP2 Family	Phage major capsid protein E	8045032	4004269	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Phage coat protein-like	8054149	3001529	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Phage coat protein-like	8054149	3001529	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	Phage_cap_E_1	e3bjqJ1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
I	Phage_cap_E_1	e3bjqI1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
H	Phage_cap_E_1	e3bjqH1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
G	Phage_cap_E_1	e3bjqG1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
F	Phage_cap_E_1	e3bjqF1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
E	Phage_cap_E_1	e3bjqE1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
D	Phage_cap_E_1	e3bjqD1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
C	Phage_cap_E_1	e3bjqC1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
B	Phage_cap_E_1	e3bjqB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)
A	Phage_cap_E_1	e3bjqA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
I	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
H	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
G	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
F	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
E	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
D	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
C	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
B	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)
A	3.90.1690.10	Alpha Beta	Alpha-Beta Complex	phage-related protein like fold	phage-related protein like domain	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR053738	Lambda phage major capsid assembly	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR005564	Major capsid protein GpE	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.