3BEM
Crystal structure of putative nitroreductase ydfN (2632848) from Bacillus subtilis at 1.65 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3bema1 | Alpha and beta proteins (a+b) | FMN-dependent nitroreductase-like | FMN-dependent nitroreductase-like | automated matches | automated matches | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
A | d3bema2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d3bemb1 | Alpha and beta proteins (a+b) | FMN-dependent nitroreductase-like | FMN-dependent nitroreductase-like | automated matches | automated matches | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d3bemb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | NADH oxidase/flavin reductase | 8058700 | 4001599 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FMN-dependent nitroreductase-like | 8058701 | 3001947 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | FMN-dependent nitroreductase-like | 8058701 | 3001947 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Nitroreductase | e3bemA1 | A: a+b two layers | X: Alpha-beta plaits | H: FMN-dependent nitroreductase-like (From Topology) | T: FMN-dependent nitroreductase-like | F: Nitroreductase | ECOD (1.6) |
B | Nitroreductase | e3bemB1 | A: a+b two layers | X: Alpha-beta plaits | H: FMN-dependent nitroreductase-like (From Topology) | T: FMN-dependent nitroreductase-like | F: Nitroreductase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.109.10 | Alpha Beta | 3-Layer(aba) Sandwich | NADH Oxidase | NADH Oxidase | CATH (4.3.0) |
B | 3.40.109.10 | Alpha Beta | 3-Layer(aba) Sandwich | NADH Oxidase | NADH Oxidase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00881 | Nitroreductase family (Nitroreductase) | Nitroreductase family | The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative NAD(P)H nitroreductase ydfN |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029479 | Nitroreductase | Domain | |
IPR000415 | Nitroreductase-like | Homologous Superfamily |