3BB6 | pdb_00003bb6

Crystal structure of the P64488 protein from E.coli (strain K12). Northeast Structural Genomics Consortium target ER596

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d3bb6d_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Uncharacterized protein YeaR	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
C	d3bb6c_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Uncharacterized protein YeaR	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
B	d3bb6b_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Uncharacterized protein YeaR	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
A	d3bb6a1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Uncharacterized protein YeaR	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Clavaminate synthase-like	8038942	3001848	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Clavaminate synthase-like	8038942	3001848	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Clavaminate synthase-like	8038942	3001848	SCOP2B (2022-06-29)
A	SCOP2 Family	TehB-like	8026563	4001921	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Clavaminate synthase-like	8038942	3001848	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DUF1971	e3bb6D1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
C	DUF1971	e3bb6C1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
B	DUF1971	e3bb6B1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
A	DUF1971	e3bb6A1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
C	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
B	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF09313	TehB-like domain (TehB-like)	TehB-like domain	This domain, previously known as DUF1971, is found at the N-terminal associated with Pfam:PF03848, and covering the whole length of the sequence in other bacterial uncharacterised proteins. TehB plays a role in both resistance to oxidative damage and ...	This domain, previously known as DUF1971, is found at the N-terminal associated with Pfam:PF03848, and covering the whole length of the sequence in other bacterial uncharacterised proteins. TehB plays a role in both resistance to oxidative damage and haem uptake/utilisation, and is important for virulence of this organism in an animal model of invasive disease. It also protects H.influenzae from tellurite exposure in vitro [1]. In Escherichia coli, TehB is thought to utilise a methyltransferase activity in the detoxification of tellurite [2].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR015392	TehB/YeaR-like domain	Domain
A, B, C, D	IPR014510	Tellurite resistance predicted, YeaR	Family
A, B, C, D	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.