Crystal structure of Pyridoxamine 5'-phosphate oxidase-like protein (NP_783940.1) from Lactobacillus plantarum at 1.55 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Putative_PNPOx_2 | e3ba3B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Putative_PNPOx_2 | ECOD (1.6) |
| A | Putative_PNPOx_2 | e3ba3A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Putative_PNPOx_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
| A | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22696 | Pyridoxamine 5'-phosphate oxidase-like (Putative_PNPOx_2) | Pyridoxamine 5'-phosphate oxidase-like | This domain is found in bacterial Pyridoxamine 5'-phosphate oxidase-like proteins. It folds into a beta-barrel capped at the top and bottom with alpha-helices. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR055196 | Pyridoxamine 5'-phosphate oxidase-like | Domain | |
| IPR012349 | FMN-binding split barrel | Homologous Superfamily |
