3B77 | pdb_00003b77

Crystal structure of a ph domain containing bacterial protein (exig_2160) from exiguobacterium sibiricum 255-15 at 2.42 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3b77b_	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)
C	d3b77c_	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)
D	d3b77d_	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)
F	d3b77f_	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)
E	d3b77e_	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)
A	d3b77a1	All beta proteins	PH domain-like barrel	PH domain-like	BPHL domain	Uncharacterized protein Exig2160	(Exiguobacterium artemiae 255-15 ) [TaxId: 262543 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	PH domain-like	8038897	3000134	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PH domain-like	8038897	3000134	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PH domain-like	8038897	3000134	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PH domain-like	8038897	3000134	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	PH domain-like	8038897	3000134	SCOP2B (2022-06-29)
A	SCOP2 Family	BPHL domain	8026518	4001832	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PH domain-like	8038897	3000134	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e3b77B1	A: a/b three-layered sandwiches	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F:	ECOD (v294.1)
C		e3b77C1	A: a/b three-layered sandwiches	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F:	ECOD (v294.1)
D		e3b77D1	A: a/b three-layered sandwiches	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F:	ECOD (v294.1)
F		e3b77F1	A: a/b three-layered sandwiches	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F:	ECOD (v294.1)
E		e3b77E1	A: a/b three-layered sandwiches	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F:	ECOD (v294.1)
A	bPH_1	e3b77A3	A: a/b three-layered sandwiches	X: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: bPH_1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
B	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
C	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
C	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
D	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
D	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
F	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
F	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
E	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
E	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
A	2.30.29.50	Mainly Beta	Roll	PH-domain like	Bacterial Pleckstrin homology domain	CATH (4.3.0)
A	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF11724	YvbH-like oligomerisation region (YvbH_ext)	YvbH-like oligomerisation region	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR012544	Bacterial Pleckstrin homology domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR021722	YvbH-like, oligomerisation domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR037063	Bacterial Pleckstrin homology domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.