3AXG | pdb_00003axg

Structure of 6-aminohexanoate-oligomer hydrolase

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Peptidase_S58	e3axgC1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
H	Peptidase_S58	e3axgH1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
O	Peptidase_S58	e3axgO1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
N	Peptidase_S58	e3axgN1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
M	Peptidase_S58	e3axgM1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
L	Peptidase_S58	e3axgL1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
K	Peptidase_S58	e3axgK1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
J	Peptidase_S58	e3axgJ1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
I	Peptidase_S58	e3axgI1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
G	Peptidase_S58	e3axgG1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
F	Peptidase_S58	e3axgF1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
E	Peptidase_S58	e3axgE1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
D	Peptidase_S58	e3axgD1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
B	Peptidase_S58	e3axgB1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)
A	Peptidase_S58	e3axgA1	A: a+b two layers	X: MocoBD/DmpA-related (From Homology)	H: MocoBD/DmpA-related	T: DmpA/ArgJ	F: Peptidase_S58	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
H	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
O	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
N	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
M	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
L	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
K	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
J	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
I	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
G	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
F	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
E	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
D	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
B	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)
A	3.60.70.12	Alpha Beta	4-Layer Sandwich	L-amino peptidase D-ALA esterase/amidase	L-amino peptidase D-ALA esterase/amidase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	PF03576	Peptidase family S58 (Peptidase_S58)	Peptidase family S58	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	Endotype 6-aminohexanoat-oligomer hydrolase	peptidase activity catalytic activity, acting on a protein aminopeptidase activity hydrolase activity exopeptidase activity catalytic activity	nylon catabolic process cellular response to stimulus catabolic process response to stimulus cellular response to xenobiotic stimulus xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus cellular response to chemical stimulus response to chemical metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR005321	Peptidase S58, DmpA	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR016117	ArgJ-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.