3AAG | pdb_00003aag

Crystal structure of C. jejuni pglb C-terminal domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	RA	e3aagB2	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: RA	ECOD (v294.1)
B	Lyase_1	e3aagB1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Lyase_1	ECOD (v294.1)
A	STT3_PglB_C	e3aagA2	A: a/b three-layered sandwiches	X: RuvA-C	H: Rubredoxin-related	T: Rubredoxin-related	F: STT3_PglB_C	ECOD (v294.1)
A	Phage_sheath_1,Gp18_domIII_N	e3aagA1	A: a/b three-layered sandwiches	X: Thiolase-like	H: Thiolase-like	T: Thiolase-like	F: Phage_sheath_1,Gp18_domIII_N	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.1380.40	Alpha Beta	3-Layer(aba) Sandwich	Pyruvate Kinase	Chain: A, domain 1	CATH (4.3.0)
A	3.40.1380.40	Alpha Beta	3-Layer(aba) Sandwich	Pyruvate Kinase	Chain: A, domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	General glycosylation pathway protein	oligosaccharyl transferase activity glycosyltransferase activity transferase activity hexosyltransferase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR003674	Oligosaccharyl transferase, STT3 subunit	Family
A, B	IPR048307	Oligosaccharyl transferase STT3, N-terminal domain	Domain
A, B	IPR048999	STT3/PglB/AglB, core domain	Domain
A, B	IPR041563	STT3 subunit PglB, C-terminal domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	MLY	Parent Component: LYS RESID: AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084
A, B	MSE	Parent Component: MET RESID: AA0075

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.