Annotations: 3A7B

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ATP-synt_ab_N	e3a7bA1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: ATP-synt_ab_N	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Toll-like receptor 2, Variable lymphocyte receptor B	amyloid-beta binding binding peptide binding protein binding signaling receptor binding Toll-like receptor binding diacyl lipopeptide binding lipid binding lipopeptide binding protein-containing complex binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity lipopolysaccharide binding amyloid-beta binding binding peptide binding protein binding signaling receptor binding Toll-like receptor binding diacyl lipopeptide binding lipid binding lipopeptide binding protein-containing complex binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity lipopolysaccharide binding carbohydrate derivative binding triacyl lipopeptide binding lipoteichoic acid binding identical protein binding glycosaminoglycan binding peptidoglycan binding pattern recognition receptor activity	regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of nitric oxide metabolic process positive regulation of nitric oxide biosynthetic process regulation of metabolic process positive regulation of cellular process regulation of localization establishment of protein localization regulation of protein localization transport matrix metallopeptidase secretion positive regulation of matrix metallopeptidase secretion positive regulation of establishment of protein localization positive regulation of secretion by cell protein localization to extracellular region positive regulation of protein transport localization secretion by cell regulation of secretion by cell positive regulation of secretion intracellular protein localization regulation of matrix metallopeptidase secretion secretion regulation of transport establishment of protein localization to extracellular region regulation of establishment of protein localization export from cell regulation of protein transport protein secretion establishment of localization positive regulation of protein secretion regulation of protein secretion regulation of secretion positive regulation of transport protein transport macromolecule localization positive regulation of protein localization import into cell positive regulation of cellular component organization regulation of cellular component organization vesicle-mediated transport cellular component organization positive regulation of endocytosis phagocytosis cellular component organization or biogenesis regulation of endocytosis regulation of phagocytosis regulation of vesicle-mediated transport positive regulation of phagocytosis endocytosis regulation of neuron projection development multicellular organismal process cellular developmental process cell projection organization cell development neuron projection development neurogenesis multicellular organism development neuron differentiation positive regulation of neuron projection development cell differentiation anatomical structure development positive regulation of cell projection organization system development developmental process plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization positive regulation of interleukin-8 production positive regulation of macromolecule biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process interleukin-8 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of interleukin-8 production regulation of chemokine production chemokine production positive regulation of chemokine production cellular response to stimulus biological process involved in interspecies interaction between organisms cellular response to lipoteichoic acid response to stimulus response to other organism response to oxygen-containing compound response to lipoteichoic acid response to external stimulus cellular response to molecule of bacterial origin cellular response to oxygen-containing compound response to biotic stimulus cellular response to biotic stimulus cellular response to chemical stimulus response to bacterium response to chemical response to external biotic stimulus response to molecule of bacterial origin interleukin-10 production regulation of interleukin-10 production positive regulation of interleukin-10 production regulation of immune effector process positive regulation of myeloid leukocyte cytokine production involved in immune response regulation of immune system process positive regulation of immune effector process myeloid leukocyte cytokine production cytokine production involved in immune response positive regulation of immune system process production of molecular mediator of immune response regulation of cytokine production involved in immune response immune response immune effector process regulation of macrophage cytokine production immune system process positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response regulation of production of molecular mediator of immune response positive regulation of macrophage cytokine production macrophage cytokine production negative regulation of biological process negative regulation of cellular process negative regulation of macromolecule metabolic process interleukin-17 production negative regulation of interleukin-17 production negative regulation of metabolic process negative regulation of cytokine production negative regulation of gene expression regulation of interleukin-17 production negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of multicellular organismal process icosanoid metabolic process leukotriene metabolic process oxoacid metabolic process carboxylic acid metabolic process small molecule metabolic process organic acid metabolic process defense response cell activation myeloid leukocyte activation leukocyte activation macrophage activation response to stress leukocyte activation involved in inflammatory response microglial cell activation inflammatory response glial cell activation neuroinflammatory response cellular response to bacterial lipoprotein response to bacterial lipoprotein response to bacterial lipopeptide cellular response to bacterial lipopeptide cellular response to triacyl bacterial lipopeptide response to triacyl bacterial lipopeptide positive regulation of response to biotic stimulus immune response-regulating cell surface receptor signaling pathway pattern recognition receptor signaling pathway cell communication immune response-activating signaling pathway positive regulation of immune response signal transduction innate immune response-activating signaling pathway immune response-activating cell surface receptor signaling pathway regulation of innate immune response regulation of response to stimulus defense response to other organism positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response regulation of defense response regulation of response to biotic stimulus regulation of response to external stimulus signaling innate immune response activating cell surface receptor signaling pathway positive regulation of response to stimulus positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of response to stress innate immune response cell surface pattern recognition receptor signaling pathway positive regulation of innate immune response cell surface receptor signaling pathway defense response to symbiont positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction regulation of signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette regulation of signaling positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of cell communication regulation of canonical NF-kappaB signal transduction positive regulation of signaling myeloid leukocyte differentiation mononuclear cell differentiation glial cell development gliogenesis microglia differentiation hemopoiesis macrophage differentiation microglia development central nervous system development glial cell differentiation myeloid cell differentiation myeloid cell development leukocyte differentiation positive regulation of ERK1 and ERK2 cascade positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade response to diacyl bacterial lipopeptide cellular response to diacyl bacterial lipopeptide regulation of interleukin-12 production interleukin-12 production positive regulation of interleukin-12 production cell surface toll-like receptor signaling pathway toll-like receptor 2 signaling pathway detection of bacterial lipoprotein detection of external biotic stimulus detection of triacyl bacterial lipopeptide detection of molecule of bacterial origin detection of biotic stimulus detection of bacterium detection of stimulus detection of chemical stimulus detection of other organism detection of bacterial lipopeptide regulation of interferon-beta production interferon-beta production positive regulation of type I interferon production type I interferon production positive regulation of interferon-beta production regulation of type I interferon production regulation of cytoskeleton organization regulation of actin filament-based process regulation of cellular component size cellular component biogenesis regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly actin filament-based process negative regulation of protein polymerization regulation of actin filament polymerization regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization negative regulation of cellular component organization protein-containing complex organization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization actin filament organization regulation of cellular component biogenesis regulation of organelle organization negative regulation of protein-containing complex assembly organelle organization negative regulation of organelle organization regulation of protein polymerization regulation of actin filament length regulation of actin cytoskeleton organization regulation of supramolecular fiber organization supramolecular fiber organization cytoskeleton organization regulation of anatomical structure size positive regulation of locomotion regulation of cell motility regulation of leukocyte migration positive regulation of leukocyte migration positive regulation of cell migration leukocyte migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion response to type II interferon response to cytokine cellular response to type II interferon response to peptide cellular response to cytokine stimulus toll-like receptor signaling pathway toll-like receptor TLR6:TLR2 signaling pathway response to lipid response to fatty acid positive regulation of interleukin-18 production regulation of interleukin-18 production interleukin-18 production regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production behavior system process learning learning or memory nervous system process cognition MyD88-dependent toll-like receptor signaling pathway regulation of inflammatory response positive regulation of inflammatory response interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production catabolic process macroautophagy positive regulation of xenophagy autophagy xenophagy regulation of autophagy positive regulation of macroautophagy process utilizing autophagic mechanism positive regulation of autophagy regulation of xenophagy regulation of catabolic process positive regulation of catabolic process regulation of macroautophagy positive regulation of programmed cell death positive regulation of striated muscle cell apoptotic process muscle cell apoptotic process regulation of apoptotic process regulation of muscle cell apoptotic process regulation of programmed cell death cell death positive regulation of apoptotic process positive regulation of muscle cell apoptotic process regulation of striated muscle cell apoptotic process striated muscle cell apoptotic process apoptotic process programmed cell death positive regulation of Wnt signaling pathway Wnt signaling pathway regulation of Wnt signaling pathway positive regulation of DNA-templated transcription RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II primary metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription response to molecule of fungal origin response to fungus cellular component assembly involved in morphogenesis myelin assembly cellular anatomical entity morphogenesis axon ensheathment ensheathment of neurons oligodendrocyte development central nervous system myelination central nervous system myelin formation myelination anatomical structure morphogenesis axon ensheathment in central nervous system oligodendrocyte differentiation anatomical structure formation involved in morphogenesis cellular response to nitrogen compound cellular response to peptidoglycan response to nitrogen compound response to peptidoglycan interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production regulation of developmental process regulation of nervous system development negative regulation of cell junction assembly cell junction assembly negative regulation of nervous system development regulation of synapse structure or activity synapse organization regulation of synapse assembly regulation of multicellular organismal development negative regulation of developmental process negative regulation of synapse organization regulation of cell junction assembly regulation of synapse organization cell junction organization synapse assembly negative regulation of synapse assembly detection of diacyl bacterial lipopeptide regulation of vascular associated smooth muscle cell migration vascular associated smooth muscle cell migration regulation of smooth muscle cell migration positive regulation of smooth muscle cell migration smooth muscle cell migration muscle cell migration positive regulation of vascular associated smooth muscle cell migration dendritic cell cytokine production regulation of dendritic cell cytokine production leukocyte mediated immunity regulation of leukocyte mediated immunity negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation regulation of response to macrophage colony-stimulating factor response to macrophage colony-stimulating factor positive regulation of response to cytokine stimulus cellular response to macrophage colony-stimulating factor stimulus regulation of response to cytokine stimulus regulation of cellular response to macrophage colony-stimulating factor stimulus positive regulation of response to macrophage colony-stimulating factor positive regulation of cellular response to macrophage colony-stimulating factor stimulus cell surface receptor signaling pathway via STAT positive regulation of receptor signaling pathway via STAT positive regulation of receptor signaling pathway via JAK-STAT regulation of receptor signaling pathway via JAK-STAT regulation of receptor signaling pathway via STAT cell surface receptor signaling pathway via JAK-STAT negative regulation of transport negative regulation of endocytosis negative regulation of phagocytosis negative regulation of interleukin-12 production positive regulation of nervous system development regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis positive regulation of gliogenesis regulation of cell development positive regulation of developmental process positive regulation of cell differentiation positive regulation of neurogenesis positive regulation of oligodendrocyte differentiation positive regulation of cell development regulation of glial cell differentiation positive regulation of glial cell differentiation regulation of oligodendrocyte differentiation defense response to Gram-positive bacterium defense response to bacterium	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex receptor complex cell body cell surface Toll-like receptor 1-Toll-like receptor 2 protein complex plasma membrane protein complex plasma membrane signaling receptor complex cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex receptor complex cell body cell surface Toll-like receptor 1-Toll-like receptor 2 protein complex plasma membrane protein complex plasma membrane signaling receptor complex membrane protein complex membrane microdomain membrane raft cell projection external side of plasma membrane side of membrane membrane-bounded organelle intracellular vesicle phagocytic vesicle intracellular membrane-bounded organelle intracellular organelle phagocytic vesicle membrane cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane organelle endocytic vesicle membrane vesicle organelle membrane endocytic vesicle Golgi apparatus endomembrane system Toll-like receptor 2-Toll-like receptor 6 protein complex nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR000372	Leucine-rich repeat N-terminal domain	Domain
A	IPR024592	Variable_lymphocyte_rcpt_C	Unknown
A	IPR001611	Leucine-rich repeat	Repeat
A	IPR050541	Leucine-rich repeat and transmembrane domain-containing protein	Family
A	IPR003591	Leucine-rich repeat, typical subtype	Repeat
A	IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Homologous Superfamily
A	IPR000483	Cysteine-rich flanking region, C-terminal	Domain
A	IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	Domain
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR001611	Leucine-rich repeat	Repeat
A	IPR017241	Toll-like receptor	Family
A	IPR003591	Leucine-rich repeat, typical subtype	Repeat

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.