30XT | pdb_000030xt

Structre of ANDV spike in complex with EC1 domain of human PCDH1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth Y]	Protocadherin-1	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cell adhesion molecule binding protein binding	developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development animal gross anatomical part developmental process system development cell adhesion cellular process regulation of biological process signaling biological regulation cell-cell signaling cell communication developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development animal gross anatomical part developmental process system development cell adhesion cellular process regulation of biological process signaling biological regulation cell-cell signaling cell communication cell-cell adhesion homophilic cell-cell adhesion	cellular anatomical structure cell junction cell-cell junction anchoring junction cell periphery plasma membrane membrane
B, D, F, H	Envelopment polyprotein	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host process symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host autophagy symbiont-mediated activation of host autophagy cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication	virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell mitochondrion host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell endoplasmic reticulum virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell mitochondrion host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell endoplasmic reticulum host cell membrane host cell endomembrane system host cell endoplasmic reticulum membrane viral membrane viral envelope host cell Golgi membrane host cell Golgi apparatus host cell surface
A, C, E, G	Envelopment polyprotein	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host process symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host autophagy symbiont-mediated activation of host autophagy cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication	virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell mitochondrion host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell endoplasmic reticulum virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell mitochondrion host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell endoplasmic reticulum host cell membrane host cell endomembrane system host cell endoplasmic reticulum membrane viral membrane viral envelope host cell Golgi membrane host cell Golgi apparatus host cell surface

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth Y]	IPR013585	Protocadherin	Domain
I [auth Y]	IPR013164	Cadherin, N-terminal	Domain
I [auth Y]	IPR015919	Cadherin-like superfamily	Homologous Superfamily
I [auth Y]	IPR050174	Protocadherin/Cadherin-CA	Unknown
I [auth Y]	IPR020894	Cadherin conserved site	Conserved Site
I [auth Y]	IPR002126	Cadherin-like	Domain
B, D, F, H	IPR048791	Glycoprotein Gc, C-terminal, bunyavirales	Domain
B, D, F, H	IPR048790	Glycoprotein Gn, base, hantavirus	Domain
B, D, F, H	IPR002532	Hantavirus glycoprotein Gc, N-terminal domain	Domain
B, D, F, H	IPR012316	ITAM motif, hantavirus type	Domain
B, D, F, H	IPR002534	Hantavirus glycoprotein Gn, head	Domain
B, D, F, H	IPR016402	Envelope glycoprotein precursor, Hantavirus	Family
A, C, E, G	IPR048791	Glycoprotein Gc, C-terminal, bunyavirales	Domain
A, C, E, G	IPR048790	Glycoprotein Gn, base, hantavirus	Domain
A, C, E, G	IPR002532	Hantavirus glycoprotein Gc, N-terminal domain	Domain
A, C, E, G	IPR012316	ITAM motif, hantavirus type	Domain
A, C, E, G	IPR002534	Hantavirus glycoprotein Gn, head	Domain
A, C, E, G	IPR016402	Envelope glycoprotein precursor, Hantavirus	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.