2YPF | pdb_00002ypf

Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATAL_effectore2ypfA1 A: alpha superhelicesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE) (From Topology)T: Transcription activator-like effector (TALE)F: TAL_effectorECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03377TAL effector repeat (TAL_effector)TAL effector repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
5'-D(*TP*AP*GP*AP*GP*GP*GP*TP*TP*AP*GP*GP*TP*TP *TP*AP*TP*AP*TP*AP*AP)-3'---
5'-D(*TP*TP*TP*AP*TP*AP*TP*AP*AP*AP*CP*CP*TP*AP *AP*CP*CP*CP*TP*CP*TP*AP)-3'---
AVRBS3- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR053450Transcription activator-like effector proteinFamily
IPR005042TAL effector repeatRepeat