CRYSTAL STRUCTURE OF THE SODIUM-COUPLED GLYCINE BETAINE SYMPORTER BETP FROM CORYNEBACTERIUM GLUTAMICUM WITH BOUND SUBSTRATE
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | RraA-like | e2witC1 | A: a/b three-layered sandwiches | X: Tautomerase/MIF-like | H: Tautomerase/MIF | T: Tautomerase/MIF | F: RraA-like | ECOD (v294.1) |
| B | RraA-like | e2witB1 | A: a/b three-layered sandwiches | X: Tautomerase/MIF-like | H: Tautomerase/MIF | T: Tautomerase/MIF | F: RraA-like | ECOD (v294.1) |
| A | BCCT | e2witA1 | A: a/b three-layered sandwiches | X: Hormone receptor domain (HRM, Pfam 02793) | H: Lesion bypass DNA polymerase (Y-family), little finger domain | T: Lesion bypass DNA polymerase (Y-family), little finger domain | F: BCCT | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.5.430 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02028 | BCCT, betaine/carnitine/choline family transporter (BCCT) | BCCT, betaine/carnitine/choline family transporter | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| GLYCINE BETAINE TRANSPORTER BETP | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000060 | BCCT transporter family | Family | |
| IPR018093 | BCCT transporter, conserved site | Conserved Site |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | APC (Amino acid-Polyamine-organoCation) superfamily | Betaine/carnitine/choline transporters |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Betaine/Choline/Carnitine Transporter (BCCT) Family | BetP glycine betaine transporter |
