2VRK | pdb_00002vrk

Structure of a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRasGEFe2vrkC1 A: alpha bundlesX: HTHH: NudixT: NudixF: RasGEFECOD (develop294)
BRasGEFe2vrkB1 A: alpha bundlesX: HTHH: NudixT: NudixF: RasGEFECOD (develop294)
AGFPe2vrkA1 A: alpha bundlesX: Profilin-likeH: sensor domainsT: sensor domainsF: GFPECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
C3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
ALPHA-L-ARABINOFURANOSIDASE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR055235Alpha-L-arabinofuranosidase 1, catalytic domainDomain
A, B, C
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily
A, B, C
IPR010720Alpha-L-arabinofuranosidase, C-terminalDomain