2VDF | pdb_00002vdf

Structure of the OpcA adhesion from Neisseria meningitidis determined by crystallization from the cubic mesophase

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2vdfa_ Membrane and cell surface proteins and peptides Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Outer membrane adhesin/invasin OpcA (Neisseria meningitidis ) [TaxId: 487 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyOuter membrane adhesin/invasin OpcA 8025111 4002901 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyOMPT-like 8037490 3001111 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae2vdfA1 A: Outer membrane meander beta-barrelsX: OMPT-likeH: OMPT-likeT: OpcAF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.128.100 Mainly Beta Beta Barrel Lipocalin OPCA outer membrane adhesin/invasinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
OUTER MEMBRANE PROTEIN - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020080Outer membrane adhesin/peptidase omptinHomologous Superfamily
IPR009876Outer membrane adhesin OpcAFamily