2RJR | pdb_00002rjr

Substrate mimic bound to SgTAM

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Structure Motif: Primary M-CSA Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	L-aspartase-like	8078443	3001572	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	L-aspartase-like	8078443	3001572	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Proteasome	e2rjrA1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Proteasome	ECOD (v294.1)
B	Proteasome	e2rjrB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Proteasome	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.275.10	Mainly Alpha	Orthogonal Bundle	Fumarase C	Chain B, domain 1	CATH (4.3.0)
A	1.20.200.10	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)
B	1.10.275.10	Mainly Alpha	Orthogonal Bundle	Fumarase C	Chain B, domain 1	CATH (4.3.0)
B	1.20.200.10	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Tyrosine aminomutase	tyrosine ammonia-lyase activity lyase activity ammonia-lyase activity catalytic activity carbon-nitrogen lyase activity isomerase activity L-tyrosine 2,3-aminomutase activity intramolecular aminotransferase activity intramolecular transferase activity	secondary metabolite biosynthetic process biosynthetic process metabolic process cellular process toxin biosynthetic process secondary metabolic process toxin metabolic process antibiotic metabolic process antibiotic biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR022314	Tyrosine 2,3-aminomutase, putative	Family
A, B	IPR024083	Fumarase/histidase, N-terminal	Homologous Superfamily
A, B	IPR001106	Aromatic amino acid lyase	Family
A, B	IPR022313	Phenylalanine/histidine ammonia-lyases, active site	Active Site
A, B	IPR008948	L-Aspartase-like	Homologous Superfamily

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A	tyrosine 2,3-aminomutase M-CSA #245	Tyrosine 2,3-aminomutase catalyses the MIO-dependent deamination of L-tyrosine to form the corresponding alpha,beta-unsaturated acid (S)-beta-tyrosine. This reaction forms part of the biosynthesis of the enediyne antitumour antibiotic C-1027. The MIO (3,5-dihydro-5-methylidene-4H-imidazol-4-one) cofactor is formed autocatalytically by cyclization and dehydration of the three amino-acid residues alanine, serine and glycine.	Defined by 2 residues: TYR:A-63GLY:A-70 \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 5.4.3.6 (PDB Primary Data) Search M-CSA Motif + EC 5.4.3.6 EC: 4.3.1.23 (UniProt) Search M-CSA Motif + EC 4.3.1.23

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.