2PRR | pdb_00002prr

Crystal structure of alkylhydroperoxidase AhpD core: uncharacterized peroxidase-related protein (YP_296737.1) from Ralstonia eutropha JMP134 at 2.15 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L	d2prrl_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
K	d2prrk_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
J	d2prrj_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
I	d2prri_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
H	d2prrh_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
G	d2prrg_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
F	d2prrf_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
E	d2prre_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
D	d2prrd_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
C	d2prrc_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
B	d2prrb_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)
A	d2prra1	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Uncharacterized protein Reut_A2532	(Cupriavidus pinatubonensis JMP134 ) [TaxId: 264198 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AhpD-like	8035998	3001907	SCOP2B (2022-06-29)
A	SCOP2 Family	Atu0492-like	8023618	4001608	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	AhpD-like	8035998	3001907	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	GatB_Yqey	e2prrL1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
K	GatB_Yqey	e2prrK1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
J	GatB_Yqey	e2prrJ1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
I	GatB_Yqey	e2prrI1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
H	GatB_Yqey	e2prrH1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
G	GatB_Yqey	e2prrG1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
F	GatB_Yqey	e2prrF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
E	GatB_Yqey	e2prrE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
D	GatB_Yqey	e2prrD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
C	GatB_Yqey	e2prrC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
B	GatB_Yqey	e2prrB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (v294.1)
A	CMD	e2prrA1	A: alpha arrays	X: AhpD-like	H: AhpD-like	T: AhpD-like	F: CMD	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
L	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
K	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
K	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
J	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
J	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
I	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
I	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
H	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
H	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
G	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
G	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
F	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
F	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
E	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
E	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
D	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
D	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
C	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
C	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
B	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
B	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
A	1.20.5.810	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	AhpD-like	CATH (4.3.0)
A	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Alkylhydroperoxidase AhpD core: uncharacterized peroxidase-related protein	peroxidase activity oxidoreductase activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor catalytic activity peroxiredoxin activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR010195	Uncharacterised peroxidase-related	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR003779	Alkyl hydroperoxide reductase AhpD/CMD-like	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR029032	AhpD-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR004675	Alkylhydroperoxidase AhpD core	Domain

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 2PRR | pdb_00002prr

Crystal structure of alkylhydroperoxidase AhpD core: uncharacterized peroxidase-related protein (YP_296737.1) from Ralstonia eutropha JMP134 at 2.15 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

2PRR | pdb_00002prr