2POS

Crystal Structure of sylvaticin, a new secreted protein from pythium sylvaticum

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Fungal elicitin	8077720	4001509	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Fungal elicitin	8077721	3001734	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Fungal elicitin	8077721	3001734	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Fungal elicitin	8077721	3001734	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Fungal elicitin	8077721	3001734	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00964	e2posA1	A: few secondary structure elements	X: Ectatomin/elicitin (From Topology)	H: Ectatomin/elicitin (From Topology)	T: Ectatomin/elicitin	F: PF00964	ECOD (1.6)
B	PF00964	e2posB1	A: few secondary structure elements	X: Ectatomin/elicitin (From Topology)	H: Ectatomin/elicitin (From Topology)	T: Ectatomin/elicitin	F: PF00964	ECOD (1.6)
C	PF00964	e2posC1	A: few secondary structure elements	X: Ectatomin/elicitin (From Topology)	H: Ectatomin/elicitin (From Topology)	T: Ectatomin/elicitin	F: PF00964	ECOD (1.6)
D	PF00964	e2posD1	A: few secondary structure elements	X: Ectatomin/elicitin (From Topology)	H: Ectatomin/elicitin (From Topology)	T: Ectatomin/elicitin	F: PF00964	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.239.10	Mainly Alpha	Orthogonal Bundle	Beta-cryptogein	Elicitin domain	CATH (4.3.0)
B	1.10.239.10	Mainly Alpha	Orthogonal Bundle	Beta-cryptogein	Elicitin domain	CATH (4.3.0)
C	1.10.239.10	Mainly Alpha	Orthogonal Bundle	Beta-cryptogein	Elicitin domain	CATH (4.3.0)
D	1.10.239.10	Mainly Alpha	Orthogonal Bundle	Beta-cryptogein	Elicitin domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00964	Elicitin (Elicitin)	Elicitin	Elicitins form a novel class of plant necrotic proteins which are secreted by Phytophthora and Pythium fungi, parasites of many economically important crops. These proteins induce leaf necrosis in infected plants and elicit an incompatible hypersensi ...	Elicitins form a novel class of plant necrotic proteins which are secreted by Phytophthora and Pythium fungi, parasites of many economically important crops. These proteins induce leaf necrosis in infected plants and elicit an incompatible hypersensitive-like reaction, leading to the development of a systemic acquired resistance against a range of fungal and bacterial plant pathogens [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	SYLVATICIN	-	symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host defense-related programmed cell death response to host defenses symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host programmed cell death response to defenses of other organism response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction modulation by symbiont of host process symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host defense-related programmed cell death response to host defenses symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host programmed cell death response to defenses of other organism response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction modulation by symbiont of host process cellular process response to host response to external biotic stimulus modulation of process of another organism	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036470	Elicitin superfamily	Homologous Superfamily
A, B, C, D	IPR002200	Elicitin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.