Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Bacterial alpha-L-rhamnosidase-like | 8046913 | 4005365 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Alpha-L-rhamnosidase C-terminal domain-like | 8046916 | 4005366 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | alpha-L-rhamnosidase precatalytic domain-like | 8047398 | 4005623 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Alpha-L-rhamnosidase N-terminal domain-like | 8050959 | 4007126 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Alpha-L-rhamnosidase N-terminal domain-like | 8051903 | 4007126 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Six-hairpin glycosidases | 8051899 | 3000970 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | YicI C-terminal domain-like | 8051900 | 3000267 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | galactose-binding domain-like | 8051901 | 3000087 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Alpha-L-rhamnosidase associated domain -like | 8051902 | 3002069 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Alpha-L-rhamnosidase associated domain -like | 8051904 | 3002069 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Bac_rhamnosid | e2okxB1 | A: a/b three-layered sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related | T: Glycoside hydrolase family 127 middle domain-related | F: Bac_rhamnosid | ECOD (v294.1) |
| B | RhaB_D2 | e2okxB3 | A: a/b three-layered sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related | T: Glycoside hydrolase family 127 middle domain-related | F: RhaB_D2 | ECOD (v294.1) |
| B | Bac_rhamnosid6H, MGH1-like_GH | e2okxB4 | A: a/b three-layered sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related | T: Glycoside hydrolase family 127 middle domain-related | F: Bac_rhamnosid6H, MGH1-like_GH | ECOD (v294.1) |
| B | P2X_receptor | e2okxB5 | A: a/b three-layered sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related | T: Glycoside hydrolase family 127 middle domain-related | F: P2X_receptor | ECOD (v294.1) |
| A | Bac_rhamnosid | e2okxA1 | A: a/b three-layered sandwiches | X: Thioredoxin-like | H: ClpP/crotonase | T: ClpP/crotonase | F: Bac_rhamnosid | ECOD (v294.1) |
| A | DEP | e2okxA4 | A: a/b three-layered sandwiches | X: Thioredoxin-like | H: ClpP/crotonase | T: ClpP/crotonase | F: DEP | ECOD (v294.1) |
| A | Pectate_lyase_2 | e2okxA3 | A: a/b three-layered sandwiches | X: Four-helical up-and-down bundle | H: Thymidylate synthase/dCMP hydroxymethylase | T: Thymidylate synthase/dCMP hydroxymethylase | F: Pectate_lyase_2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| B | 2.60.420.10 | Mainly Beta | Sandwich | Maltose phosphorylase, domain 3 | Maltose phosphorylase, domain 3 | CATH (4.3.0) |
| B | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
| A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| A | 2.60.420.10 | Mainly Beta | Sandwich | Maltose phosphorylase, domain 3 | Maltose phosphorylase, domain 3 | CATH (4.3.0) |
| A | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) |
