2OKX | pdb_00002okx

Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Bacterial alpha-L-rhamnosidase-like	8046913	4005365	SCOP2 (2022-06-29)
A	SCOP2 Family	Alpha-L-rhamnosidase C-terminal domain-like	8046916	4005366	SCOP2 (2022-06-29)
A	SCOP2 Family	alpha-L-rhamnosidase precatalytic domain-like	8047398	4005623	SCOP2 (2022-06-29)
A	SCOP2 Family	Alpha-L-rhamnosidase N-terminal domain-like	8050959	4007126	SCOP2 (2022-06-29)
A	SCOP2 Family	Alpha-L-rhamnosidase N-terminal domain-like	8051903	4007126	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Six-hairpin glycosidases	8051899	3000970	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YicI C-terminal domain-like	8051900	3000267	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	galactose-binding domain-like	8051901	3000087	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Alpha-L-rhamnosidase associated domain -like	8051902	3002069	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Alpha-L-rhamnosidase associated domain -like	8051904	3002069	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Bac_rhamnosid_N	e2okxB1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid_N	ECOD (1.6)
B	Bac_rhamnosid	e2okxB2	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid	ECOD (1.6)
B	EUF07628	e2okxB3	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07628	ECOD (1.6)
B	Bac_rhamnosid_C	e2okxB5	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycoside hydrolase family 127 middle domain-related (From Topology)	T: Glycoside hydrolase family 127 middle domain-related	F: Bac_rhamnosid_C	ECOD (1.6)
B	Bac_rhamnosid6H	e2okxB4	A: alpha superhelices	X: Repetitive alpha hairpins	H: alpha/alpha toroid (From Topology)	T: alpha/alpha toroid	F: Bac_rhamnosid6H	ECOD (1.6)
A	Bac_rhamnosid_N	e2okxA4	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid_N	ECOD (1.6)
A	Bac_rhamnosid	e2okxA1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid	ECOD (1.6)
A	EUF07628	e2okxA6	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07628	ECOD (1.6)
A	Bac_rhamnosid_C	e2okxA3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycoside hydrolase family 127 middle domain-related (From Topology)	T: Glycoside hydrolase family 127 middle domain-related	F: Bac_rhamnosid_C	ECOD (1.6)
A	Bac_rhamnosid6H	e2okxA5	A: alpha superhelices	X: Repetitive alpha hairpins	H: alpha/alpha toroid (From Topology)	T: alpha/alpha toroid	F: Bac_rhamnosid6H	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
B	2.60.420.10	Mainly Beta	Sandwich	Maltose phosphorylase, domain 3	Maltose phosphorylase, domain 3	CATH (4.3.0)
B	1.50.10.10	Mainly Alpha	Alpha/alpha barrel	Glycosyltransferase		CATH (4.3.0)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
A	2.60.420.10	Mainly Beta	Sandwich	Maltose phosphorylase, domain 3	Maltose phosphorylase, domain 3	CATH (4.3.0)
A	1.50.10.10	Mainly Alpha	Alpha/alpha barrel	Glycosyltransferase		CATH (4.3.0)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.