2OJK | pdb_00002ojk

Crystal Structure of Green Fluorescent Protein from Zoanthus sp at 2.2 A Resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2ojkb_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)
Ad2ojka_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyGFP-like 8081049 3000576 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGFP-like 8081049 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGFPe2ojkB1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)
AGFPe2ojkA1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
GFP-like fluorescent chromoprotein FP506- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
NYG Parent Component: ASN, TYR, GLY

RESID:  AA0380

PSI-MOD :  L-asparagine 5-imidazolinone glycine MOD:00385