2OIT | pdb_00002oit

Crystal Structure of the N-terminal Domain of the Human Proto-oncogene Nup214/CAN

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Cytoplasmic filament nucleoporins Nup159/Nup214 NTD-like	8090973	4003227	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Nucleoporin beta-propeller domain	8090974	3000456	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LMWPc	e2oitA1	A: a/b three-layered sandwiches	X: Profilin-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: LMWPc	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16755	NUP159/214 beta propeller (Beta-prop_NUP159_NUP214)	NUP159/214 beta propeller	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nucleoporin 214kDa	nucleocytoplasmic carrier activity nuclear export signal receptor activity molecular carrier activity structural molecule activity structural constituent of nuclear pore nuclear localization sequence binding signal sequence binding binding peptide binding	cellular localization establishment of protein localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein export from nucleus establishment of localization localization intercellular transport protein transport establishment of localization in cell macromolecule localization cellular process cellular localization establishment of protein localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein export from nucleus establishment of localization localization intercellular transport protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization nuclear export intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process regulation of biological process regulation of cellular process biological regulation cell cycle regulation of cell cycle regulation of localization regulation of transport regulation of nucleocytoplasmic transport regulation of cellular localization regulation of intracellular transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein localization to organelle protein import into nucleus	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol protein-containing complex nuclear protein-containing complex membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol protein-containing complex nuclear protein-containing complex nuclear pore cytoplasmic side of nuclear pore membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR039462	Nucleoporin Nup159/Nup146, N-terminal	Domain
A	IPR041553	Nuclear pore complex protein Nup214, phenylalanine-glycine (FG) domain	Domain
A	IPR001680	WD40 repeat	Repeat
A	IPR026054	Nuclear pore complex protein	Family
A	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P35658	acute myeloid leukemia childhood acute lymphoblastic leukemia Leukemia, Lymphocytic, Acute, L2 myelodysplastic syndrome astrocytic tumor glioblastoma oral cavity cancer cancer leukemia, acute lymphocytic, susceptibility to, 1 medulloblastoma osteosarcoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.