2OC6

Crystal structure of a protein from the duf1801 family (ydhg, bsu05750) from bacillus subtilis at 1.75 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2oc6b2	Alpha and beta proteins (a+b)	Secretion chaperone-like	YdhG-like	YdhG-like	Uncharacterized protein YdhG	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2oc6b3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2oc6a1	Alpha and beta proteins (a+b)	Secretion chaperone-like	YdhG-like	YdhG-like	Uncharacterized protein YdhG	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2oc6a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	YdhG-like	8035054	3001474	SCOP2B (2022-06-29)
A	SCOP2 Family	YdhG-like	8022674	4002604	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YdhG-like	8035054	3001474	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PF08818	e2oc6B2	A: a+b two layers	X: Type III secretory system chaperone-like	H: YdhG-like (From Topology)	T: YdhG-like	F: PF08818	ECOD (1.6)
A	PF08818	e2oc6A2	A: a+b two layers	X: Type III secretory system chaperone-like	H: YdhG-like (From Topology)	T: YdhG-like	F: PF08818	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.90.1150.200	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
A	3.90.1150.200	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08818	Domain of unknown function (DU1801) (DUF1801)	Domain of unknown function (DU1801)	This domain is found in the Intracellular iron chaperone frataxin YdhG [1] and the uncharacterised protein YdeI from Bacillus subtilis.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	YdhG protein	cation binding ion binding binding metal ion binding small molecule binding	localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR014922	YdhG-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.