2MSP | pdb_00002msp

MAJOR SPERM PROTEIN, BETA ISOFORM, ENGINEERED C59S/T90C MUTANT, PUTATIVE SUBFILAMENT STRUCTURE, PH 8.5

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d2msph_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
G	d2mspg_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
F	d2mspf_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
E	d2mspe_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
D	d2mspd_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
C	d2mspc_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
B	d2mspb_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)
A	d2mspa_	All beta proteins	Immunoglobulin-like beta-sandwich	PapD-like	MSP-like	Major sperm protein, MSP	pig roundworm (Ascaris suum ) [TaxId: 6253 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	PapD-like	8055329	3002067	SCOP2B (2022-06-29)
A	SCOP2 Family	MSP-like	8055328	4007566	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PapD-like	8055329	3002067	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Copper-bind	e2mspH1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
G	Copper-bind	e2mspG1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
F	Copper-bind	e2mspF1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
E	Copper-bind	e2mspE1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
D	Copper-bind	e2mspD1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
C	Copper-bind	e2mspC1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
B	Copper-bind	e2mspB1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)
A	Copper-bind	e2mspA1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
G	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
F	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
E	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
D	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
C	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	MAJOR SPERM PROTEIN	identical protein binding protein binding binding	-	cell projection cellular anatomical structure pseudopodium plasma membrane bounded cell projection intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000535	Major sperm protein (MSP) domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR051155	Nematode Major Sperm	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008962	PapD-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.