2J9V
2 Angstrom X-ray structure of the yeast ESCRT-I Vps28 C-terminus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2j9va_ | All alpha proteins | Four-helical up-and-down bundle | VPS28 C-terminal domain-like | VPS28 C-terminal domain-like | automated matches | BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | VPS28 C-terminal domain-like | 8043070 | 3001082 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.1130 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Vps28 C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03997 | VPS28 protein (VPS28) | VPS28 protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037206 | VPS28, C-terminal domain superfamily | Homologous Superfamily | |
IPR007143 | Vacuolar protein sorting-associated Vps28 | Family | |
IPR017899 | Vacuolar protein sorting-associated, VPS28, C-terminal | Domain | |
IPR017898 | Vacuolar protein sorting-associated, VPS28, N-terminal | Domain | |
IPR038358 | VPS28, N-terminal domain superfamily | Homologous Superfamily | |
IPR037202 | ESCRT assembly domain | Homologous Superfamily |