Crystal structure of exopolyphosphatase (PPX) from E. coli O157:H7


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd2flod1 All alpha proteins HD-domain/PDEase-like HD-domain/PDEase-like Ppx associated domain Exopolyphosphatase Ppx C-terminal domain (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Dd2flod2 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Ppx/GppA phosphatase Exopolyphosphatase Ppx (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Cd2floc1 All alpha proteins HD-domain/PDEase-like HD-domain/PDEase-like Ppx associated domain Exopolyphosphatase Ppx C-terminal domain (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Cd2floc2 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Ppx/GppA phosphatase Exopolyphosphatase Ppx (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Bd2flob1 All alpha proteins HD-domain/PDEase-like HD-domain/PDEase-like Ppx associated domain Exopolyphosphatase Ppx C-terminal domain (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Bd2flob2 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Ppx/GppA phosphatase Exopolyphosphatase Ppx (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Ad2floa1 All alpha proteins HD-domain/PDEase-like HD-domain/PDEase-like Ppx associated domain Exopolyphosphatase Ppx C-terminal domain (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)
Ad2floa2 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Ppx/GppA phosphatase Exopolyphosphatase Ppx (Escherichia coli O157:H7 ) [TaxId: 83334 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DIon_trans_2e2floD1 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: Ion_trans_2ECOD (v295.2)
DCpn60_TCP1e2floD2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: Cpn60_TCP1ECOD (v295.2)
CIon_trans_2e2floC1 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: Ion_trans_2ECOD (v295.2)
CCpn60_TCP1e2floC2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: Cpn60_TCP1ECOD (v295.2)
BIon_trans_2e2floB1 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: Ion_trans_2ECOD (v295.2)
BCpn60_TCP1e2floB2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: Cpn60_TCP1ECOD (v295.2)
AIon_trans_2e2floA1 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: Ion_trans_2ECOD (v295.2)
ACpn60_TCP1e2floA2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: Cpn60_TCP1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02541Ppx/GppA phosphatase family (Ppx-GppA)Ppx/GppA phosphatase family- Family
A, B, C, D
PF21447Ppx/GppA phosphatase, domain III (Ppx-GppA_III)Ppx/GppA phosphatase, domain IIIPpx/GppA phosphatases belong to ASKHA (acetate and sugar kinases, Hsp70, actin) which has an N-terminal (Pfam:PF02541) nucleotide-binding domain (domains I/II), domain III which corresponds to the catalytic phosphohydrolase domain with the common hel ...Ppx/GppA phosphatases belong to ASKHA (acetate and sugar kinases, Hsp70, actin) which has an N-terminal (Pfam:PF02541) nucleotide-binding domain (domains I/II), domain III which corresponds to the catalytic phosphohydrolase domain with the common helical fold and domain IV [1-3]. This entry represents domain III.
Domain