2F6A
Collagen Adhesin and Collagen Complex Structure
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Bacterial adhesin-like | 8040195 | 3000723 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Bacterial adhesin-like | 8040195 | 3000723 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Bacterial adhesin-like | 8040195 | 3000723 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Bacterial adhesin-like | 8040195 | 3000723 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF05737 | e2f6aB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF05737 | ECOD (1.6) |
B | PF17961 | e2f6aB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
C | PF05737 | e2f6aC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF05737 | ECOD (1.6) |
C | PF17961 | e2f6aC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
A | PF05737 | e2f6aA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF05737 | ECOD (1.6) |
A | PF17961 | e2f6aA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
D | PF05737 | e2f6aD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF05737 | ECOD (1.6) |
D | PF17961 | e2f6aD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01391 | Collagen triple helix repeat (20 copies) (Collagen) | Collagen triple helix repeat (20 copies) | - | Repeat | |
PF05737 | Collagen binding domain (Collagen_bind) | Collagen binding domain | The domain fold is a jelly-roll, composed of two antiparallel beta-sheets and two short alpha-helices [1]. A groove on beta-sheet I exhibited the best surface complementarity to the collagen. This site partially overlaps with the peptide sequence pre ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Collagen | - | - | ||
Collagen adhesin |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR017095 | Saimiri transformation-associated protein | Family | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR008456 | Collagen binding domain | Domain | |
IPR041033 | Prealbumin-like fold domain | Domain | |
IPR008454 | Collagen-binding surface protein Cna-like, B-type domain | Domain | |
IPR008966 | Adhesion domain superfamily | Homologous Superfamily | |
IPR011252 | Fibrogen-binding domain 1 | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |