2BKC | pdb_00002bkc

The X-ray structure of the H43G Listeria innocua Dps mutant

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
X [auth Y]d2bkcy_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
W [auth X]d2bkcx_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Vd2bkcv_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Ud2bkcu_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Td2bkct_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Sd2bkcs_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Rd2bkcr_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Qd2bkcq_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Pd2bkcp_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Od2bkco_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Nd2bkcn_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Md2bkcm_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Ld2bkcl_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Kd2bkck_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Jd2bkcj_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Id2bkci_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Hd2bkch_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Gd2bkcg_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Fd2bkcf_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Ed2bkce_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Dd2bkcd_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Cd2bkcc_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Bd2bkcb_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)
Ad2bkca1 All alpha proteins Ferritin-like Ferritin-like Ferritin Dodecameric ferritin homolog (Listeria innocua ) [TaxId: 1642 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
X [auth Y]SCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
USCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFerritin-like 8037003 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
X [auth Y]e2bkcY1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
W [auth X]e2bkcX1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ve2bkcV1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ue2bkcU1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Te2bkcT1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Se2bkcS1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Re2bkcR1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Qe2bkcQ1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Pe2bkcP1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Oe2bkcO1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ne2bkcN1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Me2bkcM1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Le2bkcL1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ke2bkcK1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Je2bkcJ1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ie2bkcI1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
He2bkcH1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ge2bkcG1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Fe2bkcF1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ee2bkcE1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
De2bkcD1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ce2bkcC1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Be2bkcB1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
Ae2bkcA1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
X [auth Y]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
W [auth X]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
V1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
U1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
T1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
S1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
R1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
Q1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
P1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
O1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
N1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
M1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
L1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
K1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
J1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
I1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
H1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
G1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
F1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
E1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
D1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
C1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
B1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
NON-HEME IRON-CONTAINING FERRITIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR012347Ferritin-likeHomologous Superfamily
A,
B,
C,
D,
E,
IPR009078Ferritin-like superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR002177DNA-binding protein DpsFamily
A,
B,
C,
D,
E,
IPR008331Ferritin/DPS domainDomain
A,
B,
C,
D,
E,
IPR023188DNA-binding protein Dps, conserved siteConserved Site