2ZJR | pdb_00002zjr

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
I [auth G]	d2zjrg1	Alpha and beta proteins (a/b)	Ribosomal protein L13	Ribosomal protein L13	Ribosomal protein L13	Ribosomal protein L13	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
G [auth E]	d2zjre1	Alpha and beta proteins (a+b)	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
F [auth D]	d2zjrd1	Alpha and beta proteins (a+b)	RL5-like	RL5-like	Ribosomal protein L5	Ribosomal protein L5	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
E [auth C]	d2zjrc1	Alpha and beta proteins (a/b)	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
D [auth B]	d2zjrb1	All beta proteins	Reductase/isomerase/elongation factor common domain	Translation proteins	Ribosomal protein L3	Ribosomal protein L3	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
DA [auth 4]	d2zjr41	Small proteins	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
C [auth A]	d2zjra1	All beta proteins	SH3-like barrel	Translation proteins SH3-like domain	C-terminal domain of ribosomal protein L2	C-terminal domain of ribosomal protein L2	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
C [auth A]	d2zjra2	All beta proteins	OB-fold	Nucleic acid-binding proteins	Cold shock DNA-binding domain-like	N-terminal domain of ribosomal protein L2	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
CA [auth 3]	d2zjr31	Alpha and beta proteins (a+b)	L35p-like	L35p-like	Ribosomal protein L35p	Ribosomal protein L35p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
BA [auth 2]	d2zjr21	Peptides	Ribosomal protein L34p	Ribosomal protein L34p	Ribosomal protein L34p	Ribosomal protein L34p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
AA [auth 1]	d2zjr11	Small proteins	Rubredoxin-like	Zn-binding ribosomal proteins	Ribosomal protein L33p	Ribosomal protein L33p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Z	d2zjrz1	Small proteins	Rubredoxin-like	Zn-binding ribosomal proteins	Ribosomal protein L32p	Ribosomal protein L32p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Y [auth W]	d2zjrw1	Alpha and beta proteins (a+b)	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Prokaryotic ribosomal protein L30	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
X [auth V]	d2zjrv1	All alpha proteins	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
W [auth U]	d2zjru1	Alpha and beta proteins (a+b)	L28p-like	L28p-like	Ribosomal protein L28	Ribosomal protein L28 (L28p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
V [auth T]	d2zjrt1	All beta proteins	Barrel-sandwich hybrid	Ribosomal L27 protein-like	Ribosomal L27 protein	Ribosomal protein L27	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
U [auth S]	d2zjrs1	All beta proteins	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein TL5 (general stress protein CTC)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
T [auth R]	d2zjrr1	All beta proteins	SH3-like barrel	Translation proteins SH3-like domain	Ribosomal proteins L24p and L21e	Ribosomal proteins L24 (L24p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
S [auth Q]	d2zjrq1	Alpha and beta proteins (a+b)	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e	L23p	Ribosomal protein L23	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
R [auth P]	d2zjrp1	Alpha and beta proteins (a+b)	Ribosomal protein L22	Ribosomal protein L22	Ribosomal protein L22	Ribosomal protein L22	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Q [auth O]	d2zjro1	All beta proteins	L21p-like	L21p-like	Ribosomal protein L21p	Ribosomal protein L21p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
P [auth N]	d2zjrn1	All alpha proteins	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20	Ribosomal protein L20	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
O [auth M]	d2zjrm1	All beta proteins	SH3-like barrel	Translation proteins SH3-like domain	Ribosomal protein L19	Ribosomal protein L19	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
N [auth L]	d2zjrl1	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Translational machinery components	Ribosomal protein L18 and S11	Ribosomal protein L18 (L18p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
M [auth K]	d2zjrk1	Alpha and beta proteins (a+b)	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
L [auth J]	d2zjrj1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	Ribosomal protein L16p/L10e	Ribosomal protein L16p	Ribosomal protein L16p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
K [auth I]	d2zjri1	Alpha and beta proteins (a/b)	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e	Ribosomal protein L15 (L15p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
J [auth H]	d2zjrh1	All beta proteins	Ribosomal protein L14	Ribosomal protein L14	Ribosomal protein L14	Ribosomal protein L14	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I [auth G]	SCOP2 Family	Ribosomal protein L13	8026176	4003623	SCOP2 (2022-06-29)
I [auth G]	SCOP2 Superfamily	Ribosomal protein L13	8038555	3001134	SCOP2 (2022-06-29)
H [auth F]	SCOP2B Superfamily	Ribosomal protein L11, C-terminal domain	8033402	3001186	SCOP2B (2022-06-29)
G [auth E]	SCOP2 Family	Ribosomal protein L6	8026173	4002033	SCOP2 (2022-06-29)
G [auth E]	SCOP2 Family	Ribosomal protein L6	8026177	4002033	SCOP2 (2022-06-29)
G [auth E]	SCOP2 Superfamily	Ribosomal protein L6	8038552	3000724	SCOP2 (2022-06-29)
G [auth E]	SCOP2 Superfamily	Ribosomal protein L6	8038556	3000724	SCOP2 (2022-06-29)
F [auth D]	SCOP2 Family	Ribosomal protein L5	8026170	4001498	SCOP2 (2022-06-29)
F [auth D]	SCOP2 Superfamily	RL5-like	8038549	3001709	SCOP2 (2022-06-29)
E [auth C]	SCOP2 Family	Ribosomal protein L4	8026167	4003628	SCOP2 (2022-06-29)
E [auth C]	SCOP2 Superfamily	Ribosomal protein L4	8038546	3001146	SCOP2 (2022-06-29)
D [auth B]	SCOP2 Family	Ribosomal protein L3	8026164	4002103	SCOP2 (2022-06-29)
D [auth B]	SCOP2 Superfamily	Translational proteins	8038543	3000811	SCOP2 (2022-06-29)
DA [auth 4]	SCOP2 Family	Ribosomal protein L36	8026153	4003715	SCOP2 (2022-06-29)
DA [auth 4]	SCOP2 Superfamily	Ribosomal protein L36	8038532	3001346	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	C-terminal domain of ribosomal protein L2	8026155	4001762	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	Cold shock DNA-binding domain-like	8026159	4001909	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8038534	3000334	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	Nucleic acid-binding proteins	8038538	3000135	SCOP2 (2022-06-29)
CA [auth 3]	SCOP2 Family	Ribosomal protein L35p	8026151	4003406	SCOP2 (2022-06-29)
CA [auth 3]	SCOP2 Superfamily	L35p-like	8038530	3000790	SCOP2 (2022-06-29)
AA [auth 1]	SCOP2 Family	Ribosomal protein L33p	8026147	4000511	SCOP2 (2022-06-29)
AA [auth 1]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8038526	3001320	SCOP2 (2022-06-29)
Z	SCOP2 Family	Ribosomal protein L32p	8026214	4000508	SCOP2 (2022-06-29)
Z	SCOP2 Superfamily	Zn-binding ribosomal proteins	8038593	3001320	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Family	Ribosomal protein L30p/L7e	8026211	4001360	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Superfamily	Ribosomal protein L30p/L7e	8038590	3001378	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Family	Ribosomal protein L29 (L29p)	8026207	4000600	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Superfamily	Ribosomal protein L29 (L29p)	8038586	3000713	SCOP2 (2022-06-29)
W [auth U]	SCOP2 Family	Ribosomal protein L28	8026206	4003961	SCOP2 (2022-06-29)
W [auth U]	SCOP2 Superfamily	L28p-like	8038585	3001966	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Family	Ribosomal L27 protein	8026203	4001900	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Superfamily	Ribosomal L27 protein-like	8038582	3000539	SCOP2 (2022-06-29)
U [auth S]	SCOP2 Family	Ribosomal protein L25-like	8026201	4002376	SCOP2 (2022-06-29)
U [auth S]	SCOP2 Superfamily	Ribosomal protein L25-like	8038580	3001161	SCOP2 (2022-06-29)
T [auth R]	SCOP2 Family	Ribosomal proteins L24p and L21e	8026199	4001752	SCOP2 (2022-06-29)
T [auth R]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8038578	3000334	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Family	L23p	8026198	4000943	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Superfamily	Ribosomal proteins S24e, L23 and L15e	8038577	3000210	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Family	Ribosomal protein L22	8026197	4001212	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Superfamily	Ribosomal protein L22	8038576	3001078	SCOP2 (2022-06-29)
Q [auth O]	SCOP2 Family	Ribosomal protein l21p	8026193	4001630	SCOP2 (2022-06-29)
Q [auth O]	SCOP2 Superfamily	l21p-like	8038572	3002005	SCOP2 (2022-06-29)
P [auth N]	SCOP2 Family	Ribosomal protein L20	8026192	4001930	SCOP2 (2022-06-29)
P [auth N]	SCOP2 Superfamily	Ribosomal protein L20	8038571	3000563	SCOP2 (2022-06-29)
O [auth M]	SCOP2 Family	Ribosomal protein L19	8026190	4001761	SCOP2 (2022-06-29)
O [auth M]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8038569	3000334	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Family	Ribosomal protein L18p and S11	8026187	4000555	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Superfamily	Translational machinery components	8038566	3000571	SCOP2 (2022-06-29)
M [auth K]	SCOP2 Family	Prokaryotic ribosomal protein L17	8026185	4003526	SCOP2 (2022-06-29)
M [auth K]	SCOP2 Superfamily	Prokaryotic ribosomal protein L17	8038564	3000995	SCOP2 (2022-06-29)
L [auth J]	SCOP2 Family	Ribosomal protein L16p	8026183	4003717	SCOP2 (2022-06-29)
L [auth J]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8038562	3000884	SCOP2 (2022-06-29)
K [auth I]	SCOP2 Family	Ribosomal proteins L15p and L18e	8026182	4003555	SCOP2 (2022-06-29)
K [auth I]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8038561	3001045	SCOP2 (2022-06-29)
J [auth H]	SCOP2 Family	Ribosomal protein L14	8026179	4001826	SCOP2 (2022-06-29)
J [auth H]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8038558	3000433	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth G]	e2zjrG1	A: HTH	X: HTH	H: winged helix domain	T: EF-hand_1, EF-hand_7	F:	ECOD (20:10:01)
H [auth F]	e2zjrF1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Leuk-A4-hydro_C	F:	ECOD (20:10:01)
G [auth E]	e2zjrE1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
F [auth D]	e2zjrD1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
E [auth C]	e2zjrC1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: E1_dh	F:	ECOD (20:10:01)
D [auth B]	e2zjrB1	A: HSP20-like	X: profilin-like	H: C-terminal domain in DHH phosphoesterases	T: PemK_toxin	F:	ECOD (20:10:01)
DA [auth 4]	e2zjr41	A: Ribosomal protein L36	X: Ribosomal protein L36	H: Ribosomal protein L36	T: Ribosomal_L36	F:	ECOD (20:10:01)
C [auth A]	e2zjrA1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: KOW, Ribosomal_L26	F:	ECOD (20:10:01)
C [auth A]	e2zjrA2	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: dUTPase	F:	ECOD (20:10:01)
CA [auth 3]	e2zjr31	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
BA [auth 2]	e2zjr21	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Leuk-A4-hydro_C	F:	ECOD (20:10:01)
AA [auth 1]	e2zjr11	A: Cytochrome P450	X: Cytochrome P450	H: Cytochrome P450	T: AP_endonuc_2	F:	ECOD (20:10:01)
Z	e2zjrZ1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: EGF_CA	F:	ECOD (20:10:01)
Y [auth W]	e2zjrW1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Fer4,DUF3470	F:	ECOD (20:10:01)
X [auth V]	e2zjrV1	A: PBZ domain	X: PBZ domain	H: PBZ domain	T: Ribosomal_L27	F:	ECOD (20:10:01)
W [auth U]	e2zjrU1	A: Ribosomal protein bL28-related	X: Ribosomal protein bL28-related	H: Ribosomal protein L28	T: Ribosomal_L28	F:	ECOD (20:10:01)
V [auth T]	e2zjrT1	A: PBZ domain	X: PBZ domain	H: PBZ domain	T: Ribosomal_L27	F:	ECOD (20:10:01)
U [auth S]	e2zjrS2	A: FwdE/GAPDH domain-like	X: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	T: DXP_redisom_C	F:	ECOD (20:10:01)
T [auth R]	e2zjrR2	A: Fusion glycoprotein F2	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: Piwi	F:	ECOD (20:10:01)
S [auth Q]	e2zjrQ1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
R [auth P]	e2zjrP1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
Q [auth O]	e2zjrO1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: CSD	F:	ECOD (20:10:01)
P [auth N]	e2zjrN1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Fe_dep_repress	F:	ECOD (20:10:01)
O [auth M]	e2zjrM1	A: HSP20-like	X: HSP20-like chaperones	H: HSP20-like chaperones	T: Dynamin_N	F:	ECOD (20:10:01)
N [auth L]	e2zjrL1	A: HSP20-like	X: profilin-like	H: C-terminal domain in DHH phosphoesterases	T: PemK_toxin	F:	ECOD (20:10:01)
M [auth K]	e2zjrK1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
L [auth J]	e2zjrJ1	A: HSP20-like	X: HSP20-like chaperones	H: HSP20-like chaperones	T: Dynamin_N	F:	ECOD (20:10:01)
K [auth I]	e2zjrI1	A: HSP20-like	X: profilin-like	H: C-terminal domain in DHH phosphoesterases	T: PemK_toxin	F:	ECOD (20:10:01)
J [auth H]	e2zjrH1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: dUTPase	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth G]	3.90.1180.10	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L13p	Chain: A	CATH (4.3.0)
H [auth F]	1.10.10.250	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Ribosomal protein L11/L12, C-terminal domain	CATH (4.3.0)
G [auth E]	3.90.930.12	Alpha Beta	Alpha-Beta Complex	Outer Surface Protein A	domain 3	CATH (4.3.0)
F [auth D]	3.30.1440.10	Alpha Beta	2-Layer Sandwich	50s Ribosomal Protein L5	Chain: A,	CATH (4.3.0)
C [auth A]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
Y [auth W]	3.30.1390.20	Alpha Beta	2-Layer Sandwich	Ribosomal Protein L30	Chain: A,	CATH (4.3.0)
U [auth S]	2.40.240.10	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (4.3.0)
U [auth S]	2.170.120.20	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit	Chain A, domain 2	CATH (4.3.0)
S [auth Q]	3.30.70.330	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	RRM (RNA recognition motif) domain	CATH (4.3.0)
R [auth P]	3.90.470.10	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
N [auth L]	3.30.420.100	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)
M [auth K]	3.90.1030.10	Alpha Beta	Alpha-Beta Complex	50s Ribosomal Protein L17	Chain: A,	CATH (4.3.0)
L [auth J]	3.90.1170.10	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
J [auth H]	2.40.150.20	Mainly Beta	Beta Barrel	Ribosomal Protein L14	Ribosomal protein L14/L23	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth G]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
G [auth E]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
F [auth D]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
F [auth D]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
E [auth C]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
D [auth B]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
DA [auth 4]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36		Domain
C [auth A]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
CA [auth 3]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
BA [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
AA [auth 1]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
Z	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
Y [auth W]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
X [auth V]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
V [auth T]	PF01016	Ribosomal L27 protein (Ribosomal_L27)	Ribosomal L27 protein	-	Family
U [auth S]	PF14693	Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)	Ribosomal protein TL5, C-terminal domain	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.	Domain
U [auth S]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
T [auth R]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
T [auth R]	PF00467	KOW motif (KOW)	KOW motif	-	Family
S [auth Q]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
R [auth P]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
P [auth N]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
O [auth M]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
M [auth K]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
K [auth I]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
J [auth H]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth G]	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome rRNA binding	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H [auth F]	50S ribosomal protein L11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
G [auth E]	50S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
F [auth D]	50S ribosomal protein L5	RNA binding binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth C]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
D [auth B]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth 4]	50S ribosomal protein L36	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
C [auth A]	50S ribosomal protein L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
CA [auth 3]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth 2]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
AA [auth 1]	50S ribosomal protein L33	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z	50S ribosomal protein L32	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
Y [auth W]	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X [auth V]	50S ribosomal protein L29	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth U]	50S ribosomal protein L28	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
V [auth T]	50S ribosomal protein L27	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth S]	50S ribosomal protein L25	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth R]	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth Y]	ribosomal 5S RNA	-	-	-
S [auth Q]	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth P]	50S ribosomal protein L22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth O]	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
P [auth N]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth M]	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth L]	50S ribosomal protein L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth K]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth J]	50S ribosomal protein L16	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth I]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth H]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A [auth X]	ribosomal 23S RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth G]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
I [auth G]	IPR005822	Large ribosomal subunit protein uL13	Family
I [auth G]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
I [auth G]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
H [auth F]	IPR020785	Large ribosomal subunit protein uL11, conserved site	Conserved Site
H [auth F]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
H [auth F]	IPR000911	Ribosomal protein uL11	Family
H [auth F]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
H [auth F]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
H [auth F]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
H [auth F]	IPR006519	Large ribosomal subunit protein uL11, bacteria	Family
G [auth E]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
G [auth E]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
G [auth E]	IPR000702	Large ribosomal subunit protein uL6-like	Family
G [auth E]	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
F [auth D]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
F [auth D]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
F [auth D]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
F [auth D]	IPR002132	Large ribosomal subunit protein uL5	Family
F [auth D]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
E [auth C]	IPR013005	Large ribosomal subunit protein uL4-like	Family
E [auth C]	IPR002136	Large ribosomal subunit protein uL4	Family
E [auth C]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
D [auth B]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D [auth B]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
D [auth B]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D [auth B]	IPR000597	Large ribosomal subunit protein uL3	Family
DA [auth 4]	IPR000473	Large ribosomal subunit protein bL36	Family
DA [auth 4]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
C [auth A]	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
C [auth A]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C [auth A]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth A]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C [auth A]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
C [auth A]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth A]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C [auth A]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C [auth A]	IPR002171	Large ribosomal subunit protein uL2	Family
CA [auth 3]	IPR021137	Large ribosomal subunit protein bL35-like	Family
CA [auth 3]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
CA [auth 3]	IPR001706	Large ribosomal subunit protein bL35	Family
CA [auth 3]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
BA [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
BA [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
AA [auth 1]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
AA [auth 1]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
AA [auth 1]	IPR001705	Large ribosomal subunit protein bL33	Family
AA [auth 1]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
Z	IPR002677	Large ribosomal subunit protein bL32	Family
Z	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
Z	IPR044957	Large ribosomal subunit protein bL32, bacteria	Family
Y [auth W]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
Y [auth W]	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
Y [auth W]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
X [auth V]	IPR050063	Universal ribosomal protein uL29	Family
X [auth V]	IPR001854	Large ribosomal subunit protein uL29	Family
X [auth V]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
X [auth V]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
W [auth U]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
W [auth U]	IPR050096	Bacterial ribosomal protein bL28	Family
W [auth U]	IPR001383	Large ribosomal subunit protein bL28, bacteria	Family
W [auth U]	IPR026569	Large ribosomal subunit protein bL28	Family
W [auth U]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
V [auth T]	IPR001684	Large ribosomal subunit protein bL27	Family
V [auth T]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
U [auth S]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
U [auth S]	IPR001021	Ribosomal protein bL25, long-form	Family
U [auth S]	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
U [auth S]	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
U [auth S]	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
U [auth S]	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
U [auth S]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
T [auth R]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
T [auth R]	IPR003256	Large ribosomal subunit protein uL24	Family
T [auth R]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
T [auth R]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
T [auth R]	IPR005824	KOW	Domain
T [auth R]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
T [auth R]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
S [auth Q]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
S [auth Q]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
S [auth Q]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
S [auth Q]	IPR013025	Large ribosomal subunit protein uL23-like	Family
R [auth P]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
R [auth P]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
R [auth P]	IPR001063	Large ribosomal subunit protein uL22	Family
R [auth P]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
R [auth P]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
Q [auth O]	IPR028909	Large ribosomal subunit protein bL21-like	Family
Q [auth O]	IPR001787	Large ribosomal subunit protein bL21	Family
Q [auth O]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
P [auth N]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
P [auth N]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
P [auth N]	IPR005813	Large ribosomal subunit protein bL20	Family
O [auth M]	IPR001857	Large ribosomal subunit protein bL19	Family
O [auth M]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
O [auth M]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
O [auth M]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
N [auth L]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
N [auth L]	IPR057268	Large ribosomal subunit protein uL18	Family
N [auth L]	IPR004389	Large ribosomal subunit protein uL18, bacteria	Family
M [auth K]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
M [auth K]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
M [auth K]	IPR000456	Large ribosomal subunit protein bL17	Family
L [auth J]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
L [auth J]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
L [auth J]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
L [auth J]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
L [auth J]	IPR047873	Large ribosomal subunit protein uL16	Family
K [auth I]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
K [auth I]	IPR030878	Large ribosomal subunit protein uL15	Family
K [auth I]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
K [auth I]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
K [auth I]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
J [auth H]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
J [auth H]	IPR000218	Large ribosomal subunit protein uL14	Family
J [auth H]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
J [auth H]	IPR005745	Large ribosomal subunit protein uL14, bacteria	Family