2Z37 | pdb_00002z37

Crystal structure of Brassica juncea chitinase catalytic module (Bjchi3)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2z37d_	Alpha and beta proteins (a+b)	Lysozyme-like	Lysozyme-like	Family 19 glycosidase	automated matches	(Brassica juncea ) [TaxId: 3707 ],	SCOPe (2.08)
C	d2z37c_	Alpha and beta proteins (a+b)	Lysozyme-like	Lysozyme-like	Family 19 glycosidase	automated matches	(Brassica juncea ) [TaxId: 3707 ],	SCOPe (2.08)
B	d2z37b_	Alpha and beta proteins (a+b)	Lysozyme-like	Lysozyme-like	Family 19 glycosidase	automated matches	(Brassica juncea ) [TaxId: 3707 ],	SCOPe (2.08)
A	d2z37a_	Alpha and beta proteins (a+b)	Lysozyme-like	Lysozyme-like	Family 19 glycosidase	automated matches	(Brassica juncea ) [TaxId: 3707 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Lysozyme-like	8067602	3001879	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Lysozyme-like	8067602	3001879	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Lysozyme-like	8067602	3001879	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Lysozyme-like	8067602	3001879	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DAO, NAD_binding_8	e2z37D1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: DAO, NAD_binding_8	ECOD (develop294)
C	DAO, NAD_binding_8	e2z37C1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: DAO, NAD_binding_8	ECOD (develop294)
B	DAO, NAD_binding_8	e2z37B1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: DAO, NAD_binding_8	ECOD (develop294)
A	DAO, NAD_binding_8	e2z37A1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: DAO, NAD_binding_8	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
D	3.30.20.10	Alpha Beta	2-Layer Sandwich	Endochitinase	domain 2	CATH (4.3.0)
C	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
C	3.30.20.10	Alpha Beta	2-Layer Sandwich	Endochitinase	domain 2	CATH (4.3.0)
B	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
B	3.30.20.10	Alpha Beta	2-Layer Sandwich	Endochitinase	domain 2	CATH (4.3.0)
A	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
A	3.30.20.10	Alpha Beta	2-Layer Sandwich	Endochitinase	domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Chitinase	chitin binding binding carbohydrate derivative binding chitinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity endochitinase activity	carbohydrate derivative catabolic process catabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process metabolic process cellular process macromolecule metabolic process chitin catabolic process carbohydrate derivative catabolic process catabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process metabolic process cellular process macromolecule metabolic process chitin catabolic process carbohydrate metabolic process polysaccharide metabolic process polysaccharide catabolic process carbohydrate catabolic process primary metabolic process defense response to fungus biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to stress response to external stimulus response to fungus response to external biotic stimulus response to biotic stimulus cell wall organization or biogenesis cell wall macromolecule catabolic process cell wall macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001002	Chitin-binding, type 1	Domain
A, B, C, D	IPR018371	Chitin-binding, type 1, conserved site	Conserved Site
A, B, C, D	IPR036861	Endochitinase-like superfamily	Homologous Superfamily
A, B, C, D	IPR000726	Glycoside hydrolase, family 19, catalytic	Domain
A, B, C, D	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.