Crystal structure of acyl CoA dehydrogenase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e2z1qB3 | A: Spectrin repeat-like | X: Organelle protein MG491 central domain | H: Organelle protein MG491 central domain | T: | F: | ECOD (20:10:01) | |
| B | e2z1qB4 | A: P-loop domains-like | X: Cas7-related | H: CRISPR-associated protein Cas7f/Csy3 | T: WD40, Beta-prop_NOL10_N | F: | ECOD (20:10:01) | |
| A | e2z1qA2 | A: Lipocalins/Streptavidin | X: Enterocin 7A and 7B | H: Enterocin 7A and 7B | T: HypA | F: | ECOD (20:10:01) | |
| A | e2z1qA1 | A: RING/U-box-like | X: SH3 | H: SH3 | T: Acyl-CoA-dh_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.10.540.10 | Mainly Alpha | Orthogonal Bundle | Butyryl-Coa Dehydrogenase, subunit A | domain 1 | CATH (4.3.0) |
| B | 2.40.110.10 | Mainly Beta | Beta Barrel | Butyryl-CoA Dehydrogenase, subunit A | domain 2 | CATH (4.3.0) |
| B | 1.20.140.10 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
| A | 1.10.540.10 | Mainly Alpha | Orthogonal Bundle | Butyryl-Coa Dehydrogenase, subunit A | domain 1 | CATH (4.3.0) |
| A | 2.40.110.10 | Mainly Beta | Beta Barrel | Butyryl-CoA Dehydrogenase, subunit A | domain 2 | CATH (4.3.0) |
| A | 1.20.140.10 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF21263 | Acyl-CoA dehydrogenase, C-terminal domain (Acyl-CoA-dh_C) | Acyl-CoA dehydrogenase, C-terminal domain | This is an all-alpha up-and-down bundle found in acyl-CoA dehydrogenases, such as Swiss:O32176 from Bacillus subtilis. | Domain | |
| PF02771 | Acyl-CoA dehydrogenase, N-terminal domain (Acyl-CoA_dh_N) | Acyl-CoA dehydrogenase, N-terminal domain | The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain. | Domain | |
| PF02770 | Acyl-CoA dehydrogenase, middle domain (Acyl-CoA_dh_M) | Acyl-CoA dehydrogenase, middle domain | Central domain of Acyl-CoA dehydrogenase has a beta-barrel fold. | Domain | |
| PF00441 | Acyl-CoA dehydrogenase, C-terminal domain (Acyl-CoA_dh_1) | Acyl-CoA dehydrogenase, C-terminal domain | C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR006091 | Acyl-CoA dehydrogenase/oxidase, middle domain | Domain | |
| IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily | Homologous Superfamily | |
| IPR046373 | Acyl-CoA oxidase/dehydrogenase, middle domain superfamily | Homologous Superfamily | |
| IPR009075 | Acyl-CoA dehydrogenase/oxidase, C-terminal | Domain | |
| IPR006089 | Acyl-CoA dehydrogenase, conserved site | Conserved Site | |
| IPR036250 | Acyl-CoA dehydrogenase-like, C-terminal | Homologous Superfamily | |
| IPR013786 | Acyl-CoA dehydrogenase/oxidase, N-terminal | Domain | |
| IPR049426 | Acyl-CoA dehydrogenase-like, C-terminal domain | Domain | |
| IPR037069 | Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily | Homologous Superfamily |














