2Z0V | pdb_00002z0v

Crystal structure of BAR domain of Endophilin-III

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2z0vb_	All alpha proteins	BAR/IMD domain-like	BAR/IMD domain-like	BAR domain	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2z0va_	All alpha proteins	BAR/IMD domain-like	BAR/IMD domain-like	BAR domain	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	BAR/IMD domain-like	8064715	3000528	SCOP2B (2022-06-29)
A	SCOP2 Family	BAR domain	8064714	4001895	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	BAR/IMD domain-like	8064715	3000528	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	BAR	e2z0vB1	A: alpha duplicates or obligate multimers	X: BAR/IMD domain-like	H: BAR/IMD domain-like (From Topology)	T: BAR/IMD domain-like	F: BAR	ECOD (1.6)
A	BAR	e2z0vA1	A: alpha duplicates or obligate multimers	X: BAR/IMD domain-like	H: BAR/IMD domain-like (From Topology)	T: BAR/IMD domain-like	F: BAR	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.1270.60	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)
A	1.20.1270.60	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	SH3-containing GRB2-like protein 3	binding lipid binding identical protein binding protein binding	developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development regulation of cellular process cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation positive regulation of neuron differentiation positive regulation of developmental process developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development regulation of cellular process cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation positive regulation of neuron differentiation positive regulation of developmental process neurogenesis neuron differentiation positive regulation of cell differentiation cell differentiation positive regulation of cellular process regulation of biological process biological regulation generation of neurons cellular process regulation of neuron differentiation localization import into cell transport endocytosis establishment of localization vesicle-mediated transport negative regulation of clathrin-dependent endocytosis regulation of localization regulation of cellular component organization negative regulation of biological process negative regulation of transport negative regulation of endocytosis cellular component organization clathrin-dependent endocytosis negative regulation of cellular process cellular component organization or biogenesis regulation of endocytosis negative regulation of cellular component organization negative regulation of receptor-mediated endocytosis regulation of transport regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport receptor-mediated endocytosis regulation of clathrin-dependent endocytosis cellular response to stimulus response to stimulus signaling signal transduction cell communication	membrane-bounded organelle intracellular anatomical structure endosome synapse intracellular vesicle intracellular membrane-bounded organelle postsynaptic endosome endomembrane system intracellular organelle postsynapse cellular anatomical structure cytoplasmic vesicle organelle cell junction membrane-bounded organelle intracellular anatomical structure endosome synapse intracellular vesicle intracellular membrane-bounded organelle postsynaptic endosome endomembrane system intracellular organelle postsynapse cellular anatomical structure cytoplasmic vesicle organelle cell junction cytoplasm vesicle endosome membrane early endosome membrane early endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane postsynaptic density, intracellular component postsynaptic specialization intracellular membraneless organelle postsynaptic specialization, intracellular component postsynaptic density neuron to neuron synapse membraneless organelle asymmetric synapse presynapse glutamatergic synapse acrosomal vesicle secretory granule secretory vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004148	BAR domain	Domain
A, B	IPR001452	SH3 domain	Domain
A, B	IPR032469	Endophilin-A3, BAR domain	Domain
A, B	IPR050384	Endophilin/SH3RF	Family
A, B	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A, B	IPR035824	Endophilin-A, SH3 domain	Domain
A, B	IPR027267	AH/BAR domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q99963	subependymal giant cell astrocytoma astrocytic tumor cystic fibrosis malignant ependymoma medulloblastoma osteosarcoma pilocytic astrocytoma psoriasis attention deficit hyperactivity disorder, inattentive type glioblastoma malignant glioma non-small cell lung carcinoma periodontitis pituitary cancer spina bifida subependymal giant cell astrocytoma astrocytic tumor cystic fibrosis malignant ependymoma medulloblastoma osteosarcoma pilocytic astrocytoma psoriasis attention deficit hyperactivity disorder, inattentive type glioblastoma malignant glioma non-small cell lung carcinoma periodontitis pituitary cancer spina bifida atypical teratoid rhabdoid tumor large cell medulloblastoma malignant mesothelioma oligodendroglioma Pick disease primitive neuroectodermal tumor

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Monotopic/peripheral	All alpha monotopic/peripheral	BAR domains	N-BAR domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.