2YGM | pdb_00002ygm

THE X-RAY CRYSTAL STRUCTURE OF TANDEM CBM51 MODULES OF SP3GH98, THE FAMILY 98 GLYCOSIDE HYDROLASE FROM STREPTOCOCCUS PNEUMONIAE SP3-BS71, IN COMPLEX WITH THE BLOOD GROUP B ANTIGEN

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BNPCBMe2ygmB3 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: NPCBMECOD (1.6)
ANPCBMe2ygmA3 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: NPCBMECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.1060 Mainly Beta Sandwich Jelly Rolls NPCBM/NEW2 domainCATH (4.3.0)
A2.60.120.1060 Mainly Beta Sandwich Jelly Rolls NPCBM/NEW2 domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
BLOOD GROUP A-AND B-CLEAVING ENDO-BETA-GALACTOSIDASE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR013222Glycosyl hydrolase family 98, putative carbohydrate-binding moduleDomain
A, B
IPR013190Glycosyl hydrolase family 98, C-terminalDomain
A, B
IPR011071Polysaccharide lyase family 8-like, C-terminalHomologous Superfamily
A, B
IPR038637NPCBM domain superfamilyHomologous Superfamily
A, B
IPR013191Glycosyl hydrolase family 98, central domainDomain
A, B
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily