Annotations: 2Y26

Transmission defective mutant of Grapevine Fanleaf virus

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
T	YjeF_N	e2y26T1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
S	YjeF_N	e2y26S1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
R	YjeF_N	e2y26R1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
Q	YjeF_N	e2y26Q1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
P	YjeF_N	e2y26P1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
O	YjeF_N	e2y26O1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
N	YjeF_N	e2y26N1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
M	YjeF_N	e2y26M1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
L	YjeF_N	e2y26L1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
K	YjeF_N	e2y26K1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
J	YjeF_N	e2y26J1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
I	YjeF_N	e2y26I1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
H	YjeF_N	e2y26H1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
G	YjeF_N	e2y26G1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
F	YjeF_N	e2y26F1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
E	YjeF_N	e2y26E1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
D	YjeF_N	e2y26D1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
C	YjeF_N	e2y26C1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
B	YjeF_N	e2y26B1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: YjeF_N	ECOD (v294.1)
A	Mur_ligase_C	e2y26A1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: Mur_ligase_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
T	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
S	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
R	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
Q	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
P	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
O	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
N	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
M	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
L	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
K	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
J	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
I	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
H	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
G	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
F	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
E	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
D	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
C	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
B	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	COAT PROTEIN	structural molecule activity	transport of virus in host, cell to cell transport of virus in multicellular host biological process involved in interspecies interaction between organisms migration in host viral process transport of virus biological process involved in interaction with host biological process involved in symbiotic interaction	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle host cell cytoplasm host cell plasmodesma host cell plasma membrane viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle host cell cytoplasm host cell plasmodesma host cell plasma membrane host cell junction host cell membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR021081	Nepovirus subgroup A, RNA2 polyprotein, Protein 2A	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR005306	Nepovirus coat protein, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR005305	Nepovirus coat protein, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR005054	Nepovirus coat protein	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2Y26 | pdb_00002y26

Transmission defective mutant of Grapevine Fanleaf virus

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage