2XKV | pdb_00002xkv

Atomic Model of the SRP-FtsY Early Conformation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilySRP/SRP receptor N-terminal domain-like 8056571 3001834 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySimibi-like P-loop NTPases 8056572 3002018 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySimibi-like P-loop NTPases 8089712 3002018 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySRP/SRP receptor N-terminal domain-like 8089711 3001834 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De2xkvD1 A: Acyl-CoA binding protein-likeX: Macro domain-likeH: Macro domain-likeT: Ribosomal_L1F:ECOD (20:10:01)
De2xkvD3 A: DEATH domainX: 6-phosphogluconate dehydrogenase C-terminal domain-likeH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT: CblDF:ECOD (20:10:01)
Ce2xkvC1 A: Lipocalins/StreptavidinX: Enterocin 7A and 7BH: Enterocin 7A and 7BT: Cpn10F:ECOD (20:10:01)
Ae2xkvA1 A: Acyl-CoA binding protein-likeX: Macro domain-likeH: Macro domain-likeT: Ribosomal_L1F:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CELL DIVISION PROTEIN FTSY
SIGNAL RECOGNITION PARTICLE PROTEIN
4.5S RNA---
SIGNAL RECOGNITION PARTICLE PROTEIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR004390Signal-recognition particle receptor FtsYFamily
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR013822Signal recognition particle SRP54, helical bundleDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
IPR022941Signal recognition particle, SRP54 subunitFamily
IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR004780Signal recognition particle proteinFamily
IPR013822Signal recognition particle SRP54, helical bundleDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
IPR022941Signal recognition particle, SRP54 subunitFamily
IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR004780Signal recognition particle proteinFamily
IPR013822Signal recognition particle SRP54, helical bundleDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily