Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPHAX-RBD-like domain8051751 4007501 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRNA_GG_binding domain-like8051913 3002072 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARNA_GG_binde2xc7A1 A: alpha arraysX: PHAX RNA-binding domain (From Topology)H: PHAX RNA-binding domain (From Topology)T: PHAX RNA-binding domainF: RNA_GG_bindECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.1440 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A PHAX RNA-binding domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF10258Phosphorylated adapter RNA export protein, RNA-binding domain (PHAX_RNA-bd)Phosphorylated adapter RNA export protein, RNA-binding domainThe phosphorylated adaptor for RNA export (PHAX) protein transports U3 snoRNA from the nucleus after transcription [1, 2]. This entry represents the highly conserved U3 snoRNA-binding domain of PHAX, which is characterised by having two pairs of adja ...The phosphorylated adaptor for RNA export (PHAX) protein transports U3 snoRNA from the nucleus after transcription [1, 2]. This entry represents the highly conserved U3 snoRNA-binding domain of PHAX, which is characterised by having two pairs of adjacent glycines with the sequence motif GGx12GG. This domain adopts a novel helical fold and binds non-specific single-stranded RNA and comprises five alpha-helices linked by short loops containing 1 to 4 residues, apart from helices alpha3 and 4 that are linked by 13 residues. The fold is unique to this kind of RNA binding domains which show no structural homology with other RNA-binding domains [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PHOSPHORYLATED ADAPTER RNA EXPORT PROTEIN
B [auth P]5'-(AP*UP*CP*GP)-3'---