2X6V
Crystal structure of human TBX5 in the DNA-bound and DNA-free form
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2x6va_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | T-box | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2x6vb_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | T-box | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00907 | e2x6vA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00907 | ECOD (1.6) |
B | PF00907 | e2x6vB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00907 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
B | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00907 | T-box (T-box) | T-box | The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001699 | T-box transcription factor | Family | |
IPR036960 | T-box superfamily | Homologous Superfamily | |
IPR046360 | T-box transcription factor, DNA-binding domain | Domain | |
IPR018186 | Transcription factor, T-box, conserved site | Conserved Site | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily |