2WZO | pdb_00002wzo

The structure of the FYR domain

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	FYR domain	8047721	4005783	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	FYR domain	8047724	3002826	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	FYRN,FYRC	e2wzoA1	A: alpha bundles	X: BtrG-like (Pfam 03674)	H: FYR domain	T: FYR domain	F: FYRN,FYRC	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.160.360	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05965	F/Y rich C-terminus (FYRC)	F/Y rich C-terminus	-	Family
A	PF05964	F/Y-rich N-terminus (FYRN)	F/Y-rich N-terminus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TRANSFORMING GROWTH FACTOR BETA REGULATOR 1	-	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process localization protein localization to organelle macromolecule localization protein localization to nucleus intracellular protein localization protein localization to nucleoplasm nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process localization protein localization to organelle macromolecule localization protein localization to nucleus intracellular protein localization protein localization to nucleoplasm regulation of protein stability biological regulation regulation of biological quality protein stabilization regulation of biological process regulation of cellular process cell cycle regulation of cell cycle negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR040092	Transforming growth factor beta regulator 1	Family
A	IPR003888	FY-rich, N-terminal	Conserved Site
A	IPR003889	FY-rich, C-terminal	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q3YBR2	astrocytic tumor cancer large cell medulloblastoma medulloblastoma ovarian cancer progressive supranuclear palsy atypical teratoid rhabdoid tumor geleophysic dysplasia malignant ependymoma non-small cell lung carcinoma Pick disease breast cancer glioblastoma malignant glioma osteosarcoma astrocytic tumor cancer large cell medulloblastoma medulloblastoma ovarian cancer progressive supranuclear palsy atypical teratoid rhabdoid tumor geleophysic dysplasia malignant ependymoma non-small cell lung carcinoma Pick disease breast cancer glioblastoma malignant glioma osteosarcoma primitive neuroectodermal tumor

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.