2WYM | pdb_00002wym

Structure of a metallo-b-lactamase


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CEpimerasee2wymC2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)
FEpimerasee2wymF2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)
AEpimerasee2wymA2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)
BEpimerasee2wymB2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)
DEpimerasee2wymD2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)
EEpimerasee2wymE2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EpimeraseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
F3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
A3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
B3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
D3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
E3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, F
PF13483Beta-lactamase superfamily domain (Lactamase_B_3)Beta-lactamase superfamily domainThis family is part of the beta-lactamase superfamily and is related to Pfam:PF00753. Domain
A, B, D, E
PF13483Beta-lactamase superfamily domain (Lactamase_B_3)Beta-lactamase superfamily domainThis family is part of the beta-lactamase superfamily and is related to Pfam:PF00753. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, F
L-ASCORBATE-6-PHOSPHATE LACTONASE ULAG
A, B, D, E
L-ASCORBATE-6-PHOSPHATE LACTONASE ULAG

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C, F
FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891