2WST
Head domain of porcine adenovirus type 4 NADC-1 isolate fibre
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Adenovirus fiber protein knob domain | 8071498 | 4002523 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus attachment protein globular domain | 8071499 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Adeno_knob | e2wstA1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
B | Adeno_knob | e2wstB1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
C | Adeno_knob | e2wstC1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
D | Adeno_knob | e2wstD1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
E | Adeno_knob | e2wstE1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
F | Adeno_knob | e2wstF1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
B | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
C | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
D | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
E | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
F | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00541 | Adenoviral fibre protein (knob domain) (Adeno_knob) | Adenoviral fibre protein (knob domain) | Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, termed the carboxy-terminal kn ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PUTATIVE FIBER PROTEIN |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR044156 | Galectin-like | Family | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR001079 | Galectin, carbohydrate recognition domain | Domain |