2WOC | pdb_00002woc

Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d2wocc_	All alpha proteins	ADP-ribosylglycohydrolase	ADP-ribosylglycohydrolase	automated matches	automated matches	(Rhodospirillum rubrum ) [TaxId: 1085 ],	SCOPe (2.08)
B	d2wocb_	All alpha proteins	ADP-ribosylglycohydrolase	ADP-ribosylglycohydrolase	automated matches	automated matches	(Rhodospirillum rubrum ) [TaxId: 1085 ],	SCOPe (2.08)
A	d2woca_	All alpha proteins	ADP-ribosylglycohydrolase	ADP-ribosylglycohydrolase	automated matches	automated matches	(Rhodospirillum rubrum ) [TaxId: 1085 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Ribosomal_L36	e2wocC1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (develop294)
B	Ribosomal_L36	e2wocB1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (develop294)
A	PDZ_6	e2wocA1	A: alpha bundles	X: Alpha-beta plaits	H: HMA-related	T: HMA, heavy metal-associated domain	F: PDZ_6	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.10.4080.10	Mainly Alpha	Orthogonal Bundle	ADP-ribosylglycohydrolase fold	ADP-ribosylation/Crystallin J1	CATH (4.3.0)
B	1.10.4080.10	Mainly Alpha	Orthogonal Bundle	ADP-ribosylglycohydrolase fold	ADP-ribosylation/Crystallin J1	CATH (4.3.0)
A	1.10.4080.10	Mainly Alpha	Orthogonal Bundle	ADP-ribosylglycohydrolase fold	ADP-ribosylation/Crystallin J1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE	cation binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on glycosyl bonds hydrolase activity hydrolase activity, hydrolyzing N-glycosyl compounds catalytic activity ADP-ribosyl-[dinitrogen reductase] hydrolase activity	protein de-ADP-ribosylation macromolecule modification metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process protein modification process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR050792	ADP-ribosylglycohydrolase-like	Family
A, B, C	IPR036705	ADP-ribosylation/Crystallin J1 superfamily	Homologous Superfamily
A, B, C	IPR005502	ADP-ribosylation/Crystallin J1	Family
A, B, C	IPR013479	ADP-ribosyl-dinitrogen reductase hydrolase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.