Structure of Mth689, a DUF54 protein from Methanothermobacter thermautotrophicus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2wnyb_ | Alpha and beta proteins (a+b) | RL5-like | RL5-like | automated matches | automated matches | (Methanothermobacter thermautotrophicus ) [TaxId: 145262 ], | SCOPe (2.08) |
| A | d2wnya_ | Alpha and beta proteins (a+b) | RL5-like | RL5-like | automated matches | automated matches | (Methanothermobacter thermautotrophicus ) [TaxId: 145262 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | SdrG_C_C | e2wnyB1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: SdrG_C_C | ECOD (v294.1) |
| A | SH2 | e2wnyA1 | A: a/b three-layered sandwiches | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain | T: PTS-regulatory domain, PRD | F: SH2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.1440.10 | Alpha Beta | 2-Layer Sandwich | 50s Ribosomal Protein L5 | Chain: A, | CATH (4.3.0) |
| A | 3.30.1440.10 | Alpha Beta | 2-Layer Sandwich | 50s Ribosomal Protein L5 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01877 | RNA binding (RNA_binding) | RNA binding | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR022803 | Large ribosomal subunit protein uL5 domain superfamily | Homologous Superfamily | |
| IPR002739 | RNA-binding protein PAB1135-like | Family |
