2WBL
Three-dimensional structure of a binary ROP-PRONE complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d2wblc_ | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | G proteins | automated matches | MOUSE-EAR CRESS (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
D | d2wbld_ | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | G proteins | automated matches | MOUSE-EAR CRESS (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PRONE-like | 8053292 | 3002173 | SCOP2B (2022-06-29) |
B | SCOP2 Family | PRONE-like | 8044825 | 4004158 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | PRONE-like | 8053292 | 3002173 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Ras-like monodomain GTPases | 8053294 | 4004043 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Ras-like P-loop GTPases | 8053295 | 3002022 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Ras-like P-loop GTPases | 8053295 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PRONE | e2wblA1 | A: alpha complex topology | X: plant-specific ROP nucleotide exchanger (PRONE) domain (From Topology) | H: plant-specific ROP nucleotide exchanger (PRONE) domain (From Topology) | T: plant-specific ROP nucleotide exchanger (PRONE) domain | F: PRONE | ECOD (1.6) |
B | PRONE | e2wblB1 | A: alpha complex topology | X: plant-specific ROP nucleotide exchanger (PRONE) domain (From Topology) | H: plant-specific ROP nucleotide exchanger (PRONE) domain (From Topology) | T: plant-specific ROP nucleotide exchanger (PRONE) domain | F: PRONE | ECOD (1.6) |
C | Ras | e2wblC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
D | Ras | e2wblD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.58.2010 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 1.20.58.1310 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.20.58.2010 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.20.58.1310 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
C | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03759 | PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) | PRONE (Plant-specific Rop nucleotide exchanger) | - | Family | |
PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038937 | Rop guanine nucleotide exchange factor | Family | |
IPR005512 | PRONE domain | Domain | |
IPR001806 | Small GTPase | Family | |
IPR003578 | Small GTPase Rho | Family | |
IPR005225 | Small GTP-binding protein domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |