2W4S
novel RNA-binding domain in Cryptosporidium parvum at 2.5 angstrom resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RNA_GG_bind | e2w4sA1 | A: alpha arrays | X: PHAX RNA-binding domain (From Topology) | H: PHAX RNA-binding domain (From Topology) | T: PHAX RNA-binding domain | F: RNA_GG_bind | ECOD (1.6) |
B | RNA_GG_bind | e2w4sB1 | A: alpha arrays | X: PHAX RNA-binding domain (From Topology) | H: PHAX RNA-binding domain (From Topology) | T: PHAX RNA-binding domain | F: RNA_GG_bind | ECOD (1.6) |
C | RNA_GG_bind | e2w4sC1 | A: alpha arrays | X: PHAX RNA-binding domain (From Topology) | H: PHAX RNA-binding domain (From Topology) | T: PHAX RNA-binding domain | F: RNA_GG_bind | ECOD (1.6) |
D | RNA_GG_bind | e2w4sD1 | A: alpha arrays | X: PHAX RNA-binding domain (From Topology) | H: PHAX RNA-binding domain (From Topology) | T: PHAX RNA-binding domain | F: RNA_GG_bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.1440 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | PHAX RNA-binding domain | CATH (4.3.0) |
B | 1.10.10.1440 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | PHAX RNA-binding domain | CATH (4.3.0) |
C | 1.10.10.1440 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | PHAX RNA-binding domain | CATH (4.3.0) |
D | 1.10.10.1440 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | PHAX RNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10258 | Phosphorylated adapter RNA export protein, RNA-binding domain (PHAX_RNA-bd) | Phosphorylated adapter RNA export protein, RNA-binding domain | The phosphorylated adaptor for RNA export (PHAX) protein transports U3 snoRNA from the nucleus after transcription [1, 2]. This entry represents the highly conserved U3 snoRNA-binding domain of PHAX, which is characterised by having two pairs of adja ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Ankyrin-repeat protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002110 | Ankyrin repeat | Repeat | |
IPR038092 | Phosphorylated adapter RNA export protein, RNA-binding domain superfamily | Homologous Superfamily | |
IPR019385 | Phosphorylated adapter RNA export protein, RNA-binding domain | Domain | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily |