2W01 | pdb_00002w01

Crystal structure of the guanylyl cyclase Cya2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2w01f_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)
E	d2w01e_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)
D	d2w01d_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)
C	d2w01c_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)
B	d2w01b_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)
A	d2w01a_	Alpha and beta proteins (a+b)	Ferredoxin-like	Nucleotide cyclase	automated matches	automated matches	(Synechocystis sp. PCC 6803 ) [TaxId: 1148 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2B (2022-06-29)
B	SCOP2 Family	Adenylyl and guanylyl cyclase catalytic domain	8064527	4001316	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8064528	3001272	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	FXa_inhibition	e2w01F1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: FXa_inhibition	ECOD (v294.1)
E	FXa_inhibition	e2w01E1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: FXa_inhibition	ECOD (v294.1)
D	FXa_inhibition	e2w01D1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: FXa_inhibition	ECOD (v294.1)
C	FXa_inhibition	e2w01C1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: FXa_inhibition	ECOD (v294.1)
B	FXa_inhibition	e2w01B1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: FXa_inhibition	ECOD (v294.1)
A	V-set	e2w01A1	A: a/b three-layered sandwiches	X: Profilin-like	H: sensor domains	T: sensor domains	F: V-set	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)
E	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)
D	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)
C	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)
B	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)
A	3.30.70.1230	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Nucleotide cyclase, GGDEF domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00211	Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc)	Adenylate and Guanylate cyclase catalytic domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	ADENYLATE CYCLASE	phosphorus-oxygen lyase activity cyclase activity lyase activity adenylate cyclase activity catalytic activity identical protein binding protein binding binding	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction intracellular signal transduction cell communication nucleoside phosphate metabolic process nucleotide biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction intracellular signal transduction cell communication nucleoside phosphate metabolic process nucleotide biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process nucleotide metabolic process cyclic nucleotide metabolic process nucleobase-containing compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process cyclic nucleotide biosynthetic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process metabolic process small molecule metabolic process phosphorus metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR050697	Adenylyl/Guanylyl Cyclase Class-3/4	Family
A, B, C, D, E A, B, C, D, E, F	IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase	Domain
A, B, C, D, E A, B, C, D, E, F	IPR007890	CHASE2	Domain
A, B, C, D, E A, B, C, D, E, F	IPR029787	Nucleotide cyclase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.