Annotations: 2VTF

X-ray crystal structure of the Endo-beta-N-acetylglucosaminidase from Arthrobacter protophormiae E173Q mutant reveals a TIM barrel catalytic domain and two ancillary domains

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Fibronectin type III	8051925	3002063	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	galactose-binding domain-like	8051923	3000087	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8051921	3000313	SCOP2B (2022-06-29)
A	SCOP2 Family	GH85 catalytic domain-like	8044661	4004066	SCOP2 (2022-06-29)
A	SCOP2 Family	GH85 putative CBM-like	8051922	4007574	SCOP2 (2022-06-29)
A	SCOP2 Family	Fibronectin type III	8051924	4007555	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8051921	3000313	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	galactose-binding domain-like	8051923	3000087	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Fibronectin type III	8051925	3002063	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e2vtfB1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F:	ECOD (v295.2)
B	GH85_C	e2vtfB2	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: GH85_C	ECOD (v295.2)
B	Methyltransf_25	e2vtfB3	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Methyltransf_25	ECOD (v295.2)
A	Melibiase_C	e2vtfA7	A: alpha arrays	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: Fusion glycoprotein F2	F: Melibiase_C	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
B	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ENDO-BETA-N-ACETYLGLUCOSAMINIDASE	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR032979	Cytosolic endo-beta-N-acetylglucosaminidase	Family
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR005201	Cytosolic endo-beta-N-acetylglucosaminidase, TIM barrel domain	Domain
A, B	IPR054110	Endo-beta-N-acetylglucosaminidase D-like, D2 domain	Domain