2VF1 | pdb_00002vf1

X-ray crystallographic structure of the picobirnavirus capsid

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEUF08558e2vf1B1 A: a+b complex topologyX: Capsid protein (From Topology)H: Capsid protein (From Topology)T: Capsid proteinF: EUF08558ECOD (1.6)
AEUF08558e2vf1A1 A: a+b complex topologyX: Capsid protein (From Topology)H: Capsid protein (From Topology)T: Capsid proteinF: EUF08558ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B6.10.250.3350 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B2.20.25.440 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
B1.20.140.120 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
A6.10.250.3350 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
A2.20.25.440 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
A1.20.140.120 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20816Picobirnavirus, Capsid protein (PBV_CP)Picobirnavirus, Capsid protein- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR048835Picobirnavirus capsid proteinFamily
A, B
IPR049178Picobirnavirus capsid protein superfamilyHomologous Superfamily